| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1048 |
|---|
| Symbol | |
|---|
| ID | 7284730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 1228920 |
|---|
| End bp | 1229690 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643581850 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002479633 |
|---|
| Protein GI | 220904321 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.62124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTGC AAGGAAAGAA AGCTCTTATA ATGGGATTGG CCAACAACAG AAGCATCGCT
TACGGCATTG CCGCTGCCCT GAAGGCTCAG GGAGCGCGCT TGGCGTTCAA CTATGTGGGT
GATGCCATTA AAAAACGTGT TGAGCCTCTG AGCGAAGAGC TGGGCGGCGA GTTTACCTTC
CAGTGCGATG TGTGTGACGA TGCACAGATT GAAAGTGCCG CATCTATCGT CAAGGAAAAA
TGGGGGGATC TGGACATTCT GGTTCACTCC GTGGCTTTTG CCAATCGCGA TGACCTGTGT
GGCCGCTTTG TGGACACTTC GCGCGACGGA TTCAATCTTG CCCTGGAAGT TTCGGCCTAT
TCCCTCACCG GGCTTTGCCG CGCCTTTGAG CCGTTGTTCA ACGAAAACTC CTCGGTGCTC
ACCATGACCT ACCACGGGTC CACTCAGGTC ATTCCCGGCT ACAATATCAT GGGTGTGGCC
AAGGCCGCTC TTGAAGCGTC CATGCGCTAT CTGGCCTACG ACCTTGGCCC CAAGGGAGTA
CGGGTCAACG CCATCAGCGC CGGCCCCATA AAAACTCTGG CCGCCTCGGC CGTGTCGAGT
CTCAAGGATA TTTTCACCAT GGTGGAAGGC AACTCCCCCC TGCGCCGCAA CGTAACCACA
GCCGATGTAG GTGGCGTGGC GGCTTTTCTG GCGTCTGATC TTGCCAGCGC CGTGACAGGG
CAGGTCATTT ACGTTGACAG CGGCTTCAGC AAGGTGGGCG TAACCGCCTG A
|
|---|
| Protein sequence | MLLQGKKALI MGLANNRSIA YGIAAALKAQ GARLAFNYVG DAIKKRVEPL SEELGGEFTF
QCDVCDDAQI ESAASIVKEK WGDLDILVHS VAFANRDDLC GRFVDTSRDG FNLALEVSAY
SLTGLCRAFE PLFNENSSVL TMTYHGSTQV IPGYNIMGVA KAALEASMRY LAYDLGPKGV
RVNAISAGPI KTLAASAVSS LKDIFTMVEG NSPLRRNVTT ADVGGVAAFL ASDLASAVTG
QVIYVDSGFS KVGVTA
|
|---|
| |