Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1032 |
Symbol | |
ID | 7284713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 1207870 |
End bp | 1209504 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643581833 |
Product | nickel ABC transporter, periplasmic nickel-binding protein |
Protein accession | YP_002479617 |
Protein GI | 220904305 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000591223 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGAA TTTTCAAGGC GTTTCCCCTA TCGTTCCGTC ATGCCTGCGG CTGTTTTCTG GCTCTGTTTT TCCTTCTGTT TTCACTCCTC CCCGCATCTG CTGCCAATGG ATGGGACAAA GACACGCTGG TGTACGCCTG GAGCAGCAAT GTGGGTCCCC TTAACCCACA CGCCTACGGC GCCAACAAGA TGTTCGCCCA GGCCCTCATA TATGAGCCGC TGGTGCAATA TGCCGAAGGC GGCAAGATCG TCCCCTGGCT GGCCGAAAGC TGGACAATCT CGCCCGATGG CAAGGTCTAC ACTTTCAATC TGCGCAAAGA TGTAAAATTT TCAGACGGCA CTCCCTTTAC AGCCGATGCA GTGGTAAAAA ACTTCGATGC CGTCCACATG AACATCAAGC GTCATGACTG GCTGGCCACG GCTGACCTTA TCGATTCATA CAAGGCTGTC GGGCCTCATA CCTTTGAACT GGTACTCAAG CAGCCGTATG CTGCAGCGCT TCAGGAACTG AGCCTGGTGC GCCCCCTGCG CTTTCTCTCC CCCGCGGCCA TGCCCGAAGA CGGCAATACC GCCCAAAGCA TAAAAGCACC TGTGGGAACT GGTCCCTGGG TTCTGGCCGA AAGCCGCAAA GGCGAATTTG ACCGCTTTGT GCGCAACGAT AATTACTGGG GCGAAAAACC GCAGATGCGC CAGCTTGTGG TCAAGGTGAT TCCTGATGCA GAAACCCGGG CTGTCGCGCT TGAAAGCGGT GAGGTGGACC TTATAGCCAC TGCCATTGCC GACCACGGCT CGGCCGGAGT AAATCCGGAT GCTTACGCCG CCCTGTCCAA GGATCCGGCC TACGCCACCC GCGAATCTTC TCCGCGCAAT ACCCGTCTGC TGGCTATGAA TACCGCCCTG TTCCCGACCA ATGAGCTTGC TGTGCGTCAG GCCATTGTGC GCGCCATTGA TCGTCCTTCC ATAATAAAGG GTGTGCTGCT CGGCCAGGAA GCTCCGGCCG AAGAACTGCT GGCTAAGGAC ATTCCCTTCT GTGATGTCGC GCTGAAGCCT TATCCCCATT CTCTTGAAGA GGCCGCCGCC ATTCTGGACA AGGCTGGCTG GAAGCTTAAA TCCGGCGAAA AATTCCGGAC CAGAGATGGC AAAACCCTGC GCCTTGAACT TAAGTTCATT GCCAACGAAA GCATCATGCG CTCCATTGCC GAAGTGGTGC AAAGCAACCT GGCCCGCATC GGCGTGGATG TTAAGCTGAT GGGCGAAGAG CCTAACGCGT TCGGGGCGTC GCAGACCGAC GGCGCATTCA ACATGATATT CTGCGAATCC AACGGTGCGC CCTATGATCC GTTCTCATAC GTTGCAGCCA TGCGCGTGGC CGGACATGCG GACTACCAGG CCCAGCGCGG GCTGCCGCAG AAAAAAGAAC TGGATGCAGC CATTACAAAA GCCCTTGCCA CAACGGACAC CAAGGAACTT CAGAACCTGT TCACCAGCAT TCTGACCATG CTGCATGAAG AAGCCGTTTA CGTTCCCGTA AGCCGTACTA TTGACAAGGC ACTGTTCAAA AAGAAAAACA TCAAGGATTT CGCCTTCAGC CCTGTCTCCT ACGAACTGCC TCTGGCGCGG ATTTCAAGGC CATAG
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Protein sequence | MNRIFKAFPL SFRHACGCFL ALFFLLFSLL PASAANGWDK DTLVYAWSSN VGPLNPHAYG ANKMFAQALI YEPLVQYAEG GKIVPWLAES WTISPDGKVY TFNLRKDVKF SDGTPFTADA VVKNFDAVHM NIKRHDWLAT ADLIDSYKAV GPHTFELVLK QPYAAALQEL SLVRPLRFLS PAAMPEDGNT AQSIKAPVGT GPWVLAESRK GEFDRFVRND NYWGEKPQMR QLVVKVIPDA ETRAVALESG EVDLIATAIA DHGSAGVNPD AYAALSKDPA YATRESSPRN TRLLAMNTAL FPTNELAVRQ AIVRAIDRPS IIKGVLLGQE APAEELLAKD IPFCDVALKP YPHSLEEAAA ILDKAGWKLK SGEKFRTRDG KTLRLELKFI ANESIMRSIA EVVQSNLARI GVDVKLMGEE PNAFGASQTD GAFNMIFCES NGAPYDPFSY VAAMRVAGHA DYQAQRGLPQ KKELDAAITK ALATTDTKEL QNLFTSILTM LHEEAVYVPV SRTIDKALFK KKNIKDFAFS PVSYELPLAR ISRP
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