Gene Ddes_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1016 
Symbol 
ID7284696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1189611 
End bp1190558 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content39% 
IMG OID643581816 
ProductLicD family protein 
Protein accessionYP_002479601 
Protein GI220904289 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3475] LPS biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGCTT CTCCAACTGA CATGATTCTG AAAAAACTCC AGCGTAAAAT GTATGAAGCG 
GAGCACTATA AACGTCTCTG GCAGGGCACC CGGGCGCAGC TTGATTATTT GAAAGAACAT 
GCCGATATCA CCAGGCTCAA GCCTGCAACG GGAAAATTGA GGCAGGAGCA GCTGGAACTG 
GTTGATGTTT GTAATAATTT TTTTGAAGAG ATCAAGGAAC TCGATATCAA ACCGTTTTTA 
ATCGCGGGGA ATTTGCTGGG GGCCGTGCGG CATAAAGGTT TTATTCCCTG GGATGATGAT 
CTGGATTTTG GCCTGATGCG GGAAGACTAC ACGAAGCTGG TCAATTTTTG CAAAAAAAAG 
TATGTTGTTA CTGATTATAC AAAAAATTAT AAAAAGAGTG AGTGGAACTA CGTTACCGGG 
TACAGCCAGT TACGCCCATA CCTGAAAGAG TACCCAAATC AGTATATTCT GGATGTTTGG 
CTCGATCAGA TCCAGATTTT TTACGGAACA TCCCTGGCTG ACAGAAAGGC GATTGATTTT 
TGGGTGTATG ATTTTTACGA CGAAAACTAC ACTTTTGCAG AACATAAACA GTATCTGGAA 
TATATTACGC AAAAGAAAAC AGAAATCGAC AATATCGCTG GCATCATTGA TTTTTTAGAT 
GAAGAAGTAA GACGTAACAA AAATATAGTA AAGGAAAGTA AAAATATTTA TTTTGGTATT 
GACTGTGTAA TGTCTTACAG TAAGCCATTC AATACATCTT TTATACCTTA TGATGTGATC 
TTTCCGTTAA AAAAGATGAA ATATGAGCAC ACTGAATTTT ATGCTCCAAA CAAGGAAATG 
GAATACCTGT TCTTTGAATT TACAGACCCT ATGAAGTTTT CAAATGATTT GGGGATTAGC 
CATCATCATG TGTTGCGGGA CAGGTTCATA CAGGAATATG GCCTGTAA
 
Protein sequence
MPASPTDMIL KKLQRKMYEA EHYKRLWQGT RAQLDYLKEH ADITRLKPAT GKLRQEQLEL 
VDVCNNFFEE IKELDIKPFL IAGNLLGAVR HKGFIPWDDD LDFGLMREDY TKLVNFCKKK 
YVVTDYTKNY KKSEWNYVTG YSQLRPYLKE YPNQYILDVW LDQIQIFYGT SLADRKAIDF 
WVYDFYDENY TFAEHKQYLE YITQKKTEID NIAGIIDFLD EEVRRNKNIV KESKNIYFGI 
DCVMSYSKPF NTSFIPYDVI FPLKKMKYEH TEFYAPNKEM EYLFFEFTDP MKFSNDLGIS 
HHHVLRDRFI QEYGL