Gene Ddes_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1001 
Symbol 
ID7284681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1170018 
End bp1171760 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content60% 
IMG OID643581801 
Productprotein of unknown function DUF181 
Protein accessionYP_002479586 
Protein GI220904274 
COG category[S] Function unknown 
COG ID[COG1944] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00702] uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACGC ATCTTCCCCG CATACAGCTG GCCCCCTGTC CCAAGGGCTA CACCCGTGAT 
CTGGACAAAA CCATGAGCCC GCCGCAAACC ATCGCCCGTG TGCGCCAGCG GCTGACAGTG
GCCGACCTGG ACATCCTTGC CAGCACCAGA AGGGTGGACG TGGACCGGTT GGGCATTCCC
GTTTTTCTCA GCATATGCGG GGCTGATGCC CGACGCATCA TGCCCACGCG CAAGCAGATG
GGCAAAGGCT CGTCTCCTGA GCAGGCCGAA GCATCTGCCC TTATGGAGCT TATGGAGCGC
TACGCATTTT TCAGCTTTTG GCAGAAGCGG CCCCATATGG AACGGGCCAC GTGGAGCGAA
GCCGAAGAGC GCTTCGGCAG CGCCCTGATT CCGCTTGCCG AAATGCTGCG CTCAGTCAAT
GAAGAACTTG ATGAAAACAA GGCCCGCCGT GTACTTAACC TTATAAGCTG GAGCTTTTAC
CCGGCAACGC GCCTGCCCGA TGAAACCACG GCATGGCTGC CGCTGGACTG GTTCAAGCTG
CTGGGCGAAT TCAACGGCAC TTCTGCGGGT AACAGCCCTG AAGAATCTCT TCTTCAGGGG
TTGAGCGAAC TTATTGAGCG CCACGTATGC TGCCTTGTTG ACCGTGATCG TTCGGGCACC
CCCACCATTG ATCCCACCAC CTGCCAGGAT CCGGTGCTTC GCCAGTTGAC TGAAGCCTTT
GCCAAAGAAG GCGTCCATCT GGTGCTCAAG GATTTTTCCC TCGGCATGCC CCTGCCCACA
GTGGCTGCCA TCGCGTGGGA TCCGGCCACC CTCGGGAAAA GTTCTGAAAT CGTGTTTACT
GCGGGTACGG CAGCGTCGCC AGCCAAGGCG GCCATCCGCG CGGTAACCGA AGTTGCCCAG
CTGGCTGGAG ATTTTTGCAC CAATGCCTGT TACGAGGCAT CCGGCCTGCC CAAGTTCAAC
ACCCTTGAAG AGGCCGCATG GCTGCTTGAC GGCCCCACCG TGAGCCTGGA AAGCCTGCCC
ACAGTAGAAA ACAGCGATAT CAGGCAGGAG CTGCTCGCCG CCCTTGAAGG CATTCGCCCG
CTGACCATGT ACGCGGTGGA AACCACCCAT CCACACCTGG GCATTCCGGC CCATTACAAT
ATCATACCCG GCATGGCTTT CAGAGAGCGT GACCGCAACC AGAGCCTGGG GCTTTTTGTC
GGCCGCAAGC TGGTGGAAGA AGCTGACGCC CCTACCGCCC TCGAGGGCCT GCGTGTGCTT
GAGCAATGCT ACCCCGGTGC GCATTTTCTC CCCTTTTTTC ACGGCATGCT GGCCTTGCGG
GCAGAAGACT GGGACAGCGC CCGCGCCTTT TTCGACCAGG CCCTGCCCCT GCAGCCGGAT
ACCGATGCCC AGGCTCTGGC AGCCTTTTAC CTGGGATATA CCGACACCCT TCAGGGGCAT
TGGGCCGAAT CCATACCGGC CCTGGCCGAA GCTGTGAAAC TGTGCCCTGA CATGAAGGAA
TACGGCAATC TGCTTGGCGT GGCGCGCTTT AAAACCGGCG ATTACGCGGC AGCGGCAGAG
GCCTTTGCCG CAGTCCTGCG CGTAGACAAG GGTTCGGCCA TGGACCTCGC CAATCTGGGC
CTGTGCGAAA AGTTTATGGG CAAGAATGAG GATGCCCGCC GCCATCTGAC GGCGGCTCTG
GAGCTGGACC CCAACCTGGA TTTTGCCCGT CAGCATCTGG CGCAGATGGA CGCACAGGGG
TAA
 
Protein sequence
MNTHLPRIQL APCPKGYTRD LDKTMSPPQT IARVRQRLTV ADLDILASTR RVDVDRLGIP 
VFLSICGADA RRIMPTRKQM GKGSSPEQAE ASALMELMER YAFFSFWQKR PHMERATWSE
AEERFGSALI PLAEMLRSVN EELDENKARR VLNLISWSFY PATRLPDETT AWLPLDWFKL
LGEFNGTSAG NSPEESLLQG LSELIERHVC CLVDRDRSGT PTIDPTTCQD PVLRQLTEAF
AKEGVHLVLK DFSLGMPLPT VAAIAWDPAT LGKSSEIVFT AGTAASPAKA AIRAVTEVAQ
LAGDFCTNAC YEASGLPKFN TLEEAAWLLD GPTVSLESLP TVENSDIRQE LLAALEGIRP
LTMYAVETTH PHLGIPAHYN IIPGMAFRER DRNQSLGLFV GRKLVEEADA PTALEGLRVL
EQCYPGAHFL PFFHGMLALR AEDWDSARAF FDQALPLQPD TDAQALAAFY LGYTDTLQGH
WAESIPALAE AVKLCPDMKE YGNLLGVARF KTGDYAAAAE AFAAVLRVDK GSAMDLANLG
LCEKFMGKNE DARRHLTAAL ELDPNLDFAR QHLAQMDAQG