| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0974 |
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| Symbol | |
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| ID | 7284654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 1134210 |
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| End bp | 1135634 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643581774 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_002479559 |
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| Protein GI | 220904247 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACTGG AACTTCGACA GCAATTAAAA CTGGCTCAGC AGTTGGTGAT GACCCCGCAA
TTACAGCAGG CCATCAAACT GCTTCAGCTC TCGCGTCTGG AGCTTCTGGA AACCGTGCAG
CAGGAACTGC TGGAAAACCC CTTTCTTGAG GAATCCCACG GAGACGACGC CGCACAGGAA
CACGTGGAAG ACCGGCGGGA AAGCGGTGCT GAGGAAGCAT ACGACAAGGA TCTTGCCAAG
GATGCAGACT GGGAGGACTA CCTTGGTGAA TTCGCCAGTA CTCCTCGCCT TGTGCAGCCG
CGCGAGTATG AAGCCGCGGA AGACATCTCC CCCCTCGAAG CCCGCTATTC CGCCAAACCC
ACCCTTGAAG GGCATCTGCT CTGGCAACTC CGCCTCTCTT CCCTTACCGA AGCCCAGAAA
GATATAGGCG AAATCATTAT CGGCAATCTT TCATCTGCGG GCTACCTGCA GGCCAGTATT
GAAGAGGTTG CCCAGATGGC CCGGGCGGAA CCCGCCGAGG CGCTGGCCGT GCTCAAACGT
GTACAGATGT TTGATCCCAT AGGCGTAGCT GCCCGCGATG CCCGCGAATG CCTGCTTGTG
CAGATACGAA GCCTCAAGTA TGACCGCGAC CCCATTTTGC TCGAGCTTGT CAACGCGCAC
CTTGAAGACC TTGAAGCCAA ACGCTACAAG CCCCTGCTGC GCAAGTTCAA GCTGGACATG
GATGAACTGA AGGAATATCT CGACATCATC CAGAGCCTTG ACCCCCTGCC CGGAGCGAGC
TTCGGCGGCG GTGAACCGGC CTACGTAAGT CCAGACGTGT TCGTGTATAA AATGGGCGAT
GAATTTATCA TCCTGCTGAA CGAAGACGGC CTGCCGCAGC TCCAGCTTTC CAACCTGACA
CAGATGAACA TGGGCACCGC TTCGGACAAG GAAAAAGAAT ACTGTACGGA AAAAATGCGC
TCGGCCACAT GGCTGATCAA GAGCCTGTAC CAGCGTCAGC GCACACTGTA CAAGGTGATG
GAAAGCATCG TGCGGCATCA GCAGCCTTTT TTTGAAGAAG GCGTCACACG GCTGGCCCCC
CTTATTCTCA AGGATATTGC CGACGACATC AGCATGCATG AATCTACCGT GAGCCGCATT
ACCACCAATA AATACGTGGC CACGCCGCAC GGTATTTTTG AACTCAAATT TTTCTTCAAC
AGCGGGCTTG AGCTGGACGA CGGCAGCCAG GTCGGCTCCG AAAGCGTCAA GGCGCTCATT
AAAAAATTCA TTGCCGAAGA AGACGCCAAA TCGCCGCTCA GTGACGAGCG CATAGGCGAA
ATGCTCAAGG AACGCCTCAA GGTCAATATT GCCCGGCGAA CTGTGGCTAA ATACCGTACC
GCCCTTGACA TCCCCTCATC CTCCAGGCGC AAGGAGCATT TCTGA
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| Protein sequence | MALELRQQLK LAQQLVMTPQ LQQAIKLLQL SRLELLETVQ QELLENPFLE ESHGDDAAQE
HVEDRRESGA EEAYDKDLAK DADWEDYLGE FASTPRLVQP REYEAAEDIS PLEARYSAKP
TLEGHLLWQL RLSSLTEAQK DIGEIIIGNL SSAGYLQASI EEVAQMARAE PAEALAVLKR
VQMFDPIGVA ARDARECLLV QIRSLKYDRD PILLELVNAH LEDLEAKRYK PLLRKFKLDM
DELKEYLDII QSLDPLPGAS FGGGEPAYVS PDVFVYKMGD EFIILLNEDG LPQLQLSNLT
QMNMGTASDK EKEYCTEKMR SATWLIKSLY QRQRTLYKVM ESIVRHQQPF FEEGVTRLAP
LILKDIADDI SMHESTVSRI TTNKYVATPH GIFELKFFFN SGLELDDGSQ VGSESVKALI
KKFIAEEDAK SPLSDERIGE MLKERLKVNI ARRTVAKYRT ALDIPSSSRR KEHF
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