Gene Ddes_0967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0967 
Symbol 
ID7284647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1128469 
End bp1129590 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content61% 
IMG OID643581767 
Productintegrase family protein 
Protein accessionYP_002479552 
Protein GI220904240 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAA AAAAACTGAA AAAAAATACT GCCGCTGCGC ATGCCGAAGC AGATTCCCTT 
GGCGCGCATT CCGGCGGCAA GGCCTTGTCC GCAGCGGGCA AGCAGGGCAA TGGCCGCAAT 
ACTGCCCCCA TGTCGCCGCC TGTGGGCGCG GCGGGCCGGG CGGGGATGCC GGATGCAGGC 
GGCCGTGCCG GTTTGCTGAT AGAAGCTTTT CTGGCCTGGA TGACCGTGCA AAAGGGGGCT 
TCTGAGGCCA CCCGCAAAGC CTATGCTGTG GATCTGGCAC AGCTTGCGGA ATTTTTACGC 
GGCCAGGAAA TTGATCTGGG GCAGCCGCAA ACCGTAACCC GGCGGCACAT GCAGGCTTTT 
CTTGCCTGGC TGTTCCGCAA GGGCGAGGCC AAAAGCTCCA TGGCGCGCAA ACTGGCTGCG 
GCCCGCTCTT TCTTCCGTTT TCAGATGCGG GGGGGCAAGG TGGCGGAGAA TGTTGCGGCC 
CAGGTGCGCA ATCCCCGCCA GGAAAAACGC CATCCCCGCG CCCTTAACGT TGATGAAACC 
TTCGCCCTGC TGGACTCGGC CACGGGGCCG GGGGGCAAGA GAGGACCCGT GGCCGGCAGT 
GCCGAGGAAG AACGCATTCT TTGCCGCGAC CTTGCCCTGG CGGAGCTGCT TTATGGCTCG 
GGGCTGCGCA TTTCCGAAGC ATTGAGCCTG GATGTGGATG ATGTGCAACT GTCTTCACGC 
GTTTTGCGCG TTATGGGCAA AGGTTCAAGG GAAAGGCTTG CTCCTCTTTC AGACACTTCT 
TTTTCCTGTC TCAAAGCGTG GCTTGAAGAG CGCCCCCTGC TGGCACTGCC CGATGAAGCG 
GCTCTTTTTG TGGGCGCACG CGGGGCGCGC CTGAACAGAA GAGAGGCCGC ACGCATTGTA 
GAGCGCCTGT GCCGCCGGGC GGGGCTGACC TTTACGGTGT CGCCCCACAG TTTGCGGCAT 
TCGTTTGCCA CTCACCTGCT GGAGGCTGGC GCAGATATGC GAAGTGTGCA GGAACTTCTG 
GGACATCAGC GGCTTACCAC AACGCAGCGC TATACGCAGG TAAGCCTTGA AAGCCTGATG 
CAGACTTACG ATCAGGCGCA TCCCAGGTCA GGTAAAAGGT AA
 
Protein sequence
MSEKKLKKNT AAAHAEADSL GAHSGGKALS AAGKQGNGRN TAPMSPPVGA AGRAGMPDAG 
GRAGLLIEAF LAWMTVQKGA SEATRKAYAV DLAQLAEFLR GQEIDLGQPQ TVTRRHMQAF 
LAWLFRKGEA KSSMARKLAA ARSFFRFQMR GGKVAENVAA QVRNPRQEKR HPRALNVDET 
FALLDSATGP GGKRGPVAGS AEEERILCRD LALAELLYGS GLRISEALSL DVDDVQLSSR 
VLRVMGKGSR ERLAPLSDTS FSCLKAWLEE RPLLALPDEA ALFVGARGAR LNRREAARIV 
ERLCRRAGLT FTVSPHSLRH SFATHLLEAG ADMRSVQELL GHQRLTTTQR YTQVSLESLM 
QTYDQAHPRS GKR