Gene Ddes_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0961 
Symbol 
ID7284641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1120525 
End bp1121229 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content62% 
IMG OID643581761 
Productsiroheme synthase 
Protein accessionYP_002479546 
Protein GI220904234 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 
TIGRFAM ID[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAC CCGCAGCCAG GCCGGCTTTT TATCCACTCT TTCTTTCCCT TGAAGGCATG 
CGCTGCCTTG TGGCGGGCCT TGGTCAGGTA GGTCGCCGCA AGCTGGAAGG ACTGCTGGCG
TGCGGCCCGG CTTTTGTGCT TGTACTGGAT ATTGACGAAC CTTCGCCCGG CGATACAGCC
CTGCAAGACT TGCTGCGCCA GGGCAATGTG CGCTTTGAAC GCCGCGCCTG CGTGGAAAAC
GACATGCAGG GCATGGCCCT TGTGTTCGCC ACAACAGGCA ACGATGCGGA AAACAGGCGT
ATCGCCGCCA TCTGCCGCCG TAACGGTGTA TTGTGCAACT GCGCAAGCGC CCCGGAAGAA
GGCAGTTTTC AGGTTCCTGC GGTGGCCCGC AAAACGCCCC TGGCGGCGGC GCTTTCAACA
GGTGGCGCAA GCCCGGCCCT GGCCCGGCGC TGGAAAGGCG AACTGGTCTG CTGGCTGGCT
CCGCGGGCGC GCATGGCCTG CCTGATGGGC CGCCTGCGGC CGCTTGTCCT TGCTTTGGGC
GGCGAGACAG GGCAGAATAC TGAGCTGTTC CGGAAACTGG CGGCCTCTCC CCTGCAGCAA
TGGCTGGAGG AAAAGGAAAT GGAAAACTGC CGCCAGTGGC TGTTGGCGGA ATTGCCAACG
GAACTGCACG CTCATATAGC GGAGTTACTT TATGATCTCC CCTGA
 
Protein sequence
METPAARPAF YPLFLSLEGM RCLVAGLGQV GRRKLEGLLA CGPAFVLVLD IDEPSPGDTA 
LQDLLRQGNV RFERRACVEN DMQGMALVFA TTGNDAENRR IAAICRRNGV LCNCASAPEE
GSFQVPAVAR KTPLAAALST GGASPALARR WKGELVCWLA PRARMACLMG RLRPLVLALG
GETGQNTELF RKLAASPLQQ WLEEKEMENC RQWLLAELPT ELHAHIAELL YDLP