Gene Ddes_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0953 
Symbol 
ID7284633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1110979 
End bp1111989 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content60% 
IMG OID643581753 
ProductPeptidase M23 
Protein accessionYP_002479538 
Protein GI220904226 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAATA TCTTCTATAT ACATCTTGCG TACAGGGCTT TTGCCGCACT GCTGCCTGTG 
CTGCTTGCAT TGGTGGTTTT TTCCGGCGGC CCGGCTCTGG CTGCTCCGCA GATAAGCCTT
GAGGCCCCTG CCACAGTAGC CAGAGGCGAC GCCTTTTTGG CTCTGGCCCT CAGCAGTGAG
GCTGTTCCGG CATTCAGCTT CAGTTGGATG GGGAAAAAGC ACACGGTTAC GGCATTGCCT
GTAGCGTCTG CCCCCGGTGC GGCACAACGC TGGCAGGCCG TTATTCTTCT GCCCGTGCCT
CTGGACGCCA GGGAAAGTGA CCTCACCCTT GGGGTGAGCC TTGCAACAGG GCAGGGCGGT
GGTAAAAAAT CCGGCGTTGC CGCGCAGGTT GTCACACAAG GCATCAGCCT TTATGACAAA
GACCGCCCGG TCCAGAAGCT CACGGTGGAC AAAAAATACG TTAACCCGCC TGCGGCACAG
ATGGAGCGCA TCAAGGCCGA CAGGGAGCTT GTGCGCAAGA CCCTTGCGGA GTATACGCCC
GAGCGTCTGT GGACGCTGCC GTTCGACAGG CCCGTTCCCG GCGGCGTTTC GAGCCTTTTT
GGCCTGAAGC GCGTGTTTAA CGGCCAGCCG CGCGGCCTGC ACCGGGGGCT GGACCTGCGG
GGCACTGAAG GCACACCCAT AGTTGCCTGC GCCGATGGCA GGGTAGCCCT GACCGGGGAT
TTGTACTTCT CGGGCAATGT GGTGTACATC AATCACGGCG AAGGGGTTTT CACTGCCTAT
CTGCACATGT CAAAAATTCT GGTCGCGCAG GGCCAGCCTG TACGCAAGGG CGAGGTCATC
GGCCTGGTAG GGGCCACTGG CCGCGTTACC GGGCCGCATT TGCATCTTTC TTTGCTGGTA
CAGGGTGTGT CTGTTGACCC ACAGCCTTTT CTGGCTGTAA AACCCGCCGC AGATGCAGCG
CCCCCGGCTG CTTCGGGCAT GGCTGCGCAA GACGCCAAAA CAGGAAAGTA G
 
Protein sequence
MKNIFYIHLA YRAFAALLPV LLALVVFSGG PALAAPQISL EAPATVARGD AFLALALSSE 
AVPAFSFSWM GKKHTVTALP VASAPGAAQR WQAVILLPVP LDARESDLTL GVSLATGQGG
GKKSGVAAQV VTQGISLYDK DRPVQKLTVD KKYVNPPAAQ MERIKADREL VRKTLAEYTP
ERLWTLPFDR PVPGGVSSLF GLKRVFNGQP RGLHRGLDLR GTEGTPIVAC ADGRVALTGD
LYFSGNVVYI NHGEGVFTAY LHMSKILVAQ GQPVRKGEVI GLVGATGRVT GPHLHLSLLV
QGVSVDPQPF LAVKPAADAA PPAASGMAAQ DAKTGK