Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0950 |
Symbol | ispG |
ID | 7284630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 1106304 |
End bp | 1107374 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643581750 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_002479535 |
Protein GI | 220904223 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAGGA ATACCAGAGC AATACGCCTT GGCGGCGTTA CTGTGGGCGG CGGCGCGCCT GTTGTTGTTC AGAGCATGAC CAATACGGAT ACCCGCGATC CGCAGGCCAC CCTGGGGCAG ATTGCCCGTC TGGCGGCCCG TGGCTGTGAA ATGGTGCGCC TGGCCGTACC TGATGAGGCG GCCGTGGCGG CCCTGCCCGC CATACGATCA GGTACGCCCC TGCCGCTTAT CGCCGACATA CACTTTGACT ACCGCCTTGC CGTGGGCGCG CTGGAGGCGG GCCTTGAGGG GTTGCGCATC AATCCCGGCA ATATTGGCCC CAAGGCGCAT GTGGACAGGG TGGTAGATGC GGCCAAGGCG CACGGCGCGG TTATTCGCGT GGGCGTCAAT TCCGGCTCGG TGGAAAAGGA TATCCTGCGC AAGTATGGCG GGCCTTGCCC CGAAGCTCTG GTGGAAAGCG CCCTTGGGCA TGTGCGTCTG CTGGAAGCCC GCGCTTTTTA CGACACCAAG ATTTCCCTCA AGTCTTCCTC TGTGCTGGAT ACCATAACAG CCTACCGTCT GCTGGCCGCT GCCTGTGATT ATCCTACACA TATCGGCATC ACCGAGGCCG GGGGCCTCAT GCGGGGAACG GTCAAATCTG CCGTAGGGCT GGGCATCCTG CTGCACGAGG GCATAGGCGA CACCCTGCGC GTGTCGCTGA CGGCAGATCC CGCCGAAGAA GTGACCGTGG CCTGGGAGAT ACTGCGGGCC CTGGGCCTCC GCTCCCGCGG GCCGGAGATT ATTTCCTGCC CCACCTGCGG CCGCACCGAG ATAGATCTTT TTGCCCTGGC ACGCGCGGTA GAAGACCGCC TGGCAACATC CACGGCCTCC ATAAAGGTGG CGGTTATGGG CTGCGTGGTC AATGGTCCCG GGGAGGCGCG CGAGGCTGAT CTTGGCGTGG CCGGGGGCCG CGACAAAGGC ATTATTTTCC GCAAGGGCGA GGTCATCCGC TCCGTGAAAG GGCAGGAAGC CTTGCTGGCG GCTTTTATGG AAGAACTGCA ATCACTGCTT AACGAAAAGG AAAATACCTA A
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Protein sequence | MGRNTRAIRL GGVTVGGGAP VVVQSMTNTD TRDPQATLGQ IARLAARGCE MVRLAVPDEA AVAALPAIRS GTPLPLIADI HFDYRLAVGA LEAGLEGLRI NPGNIGPKAH VDRVVDAAKA HGAVIRVGVN SGSVEKDILR KYGGPCPEAL VESALGHVRL LEARAFYDTK ISLKSSSVLD TITAYRLLAA ACDYPTHIGI TEAGGLMRGT VKSAVGLGIL LHEGIGDTLR VSLTADPAEE VTVAWEILRA LGLRSRGPEI ISCPTCGRTE IDLFALARAV EDRLATSTAS IKVAVMGCVV NGPGEAREAD LGVAGGRDKG IIFRKGEVIR SVKGQEALLA AFMEELQSLL NEKENT
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