Gene Ddes_0927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0927 
Symbol 
ID7284604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1081803 
End bp1082552 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content57% 
IMG OID643581724 
ProductCRISPR-associated protein Cas5 family 
Protein accessionYP_002479512 
Protein GI220904200 
COG category 
COG ID 
TIGRFAM ID[TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGCTG ACGTTTGCTG CCTTGCCCTG CGCTTGCAGG CCCCCATGCT CTCGTTTGGC 
AATGAAAGCC GGTTTAACCG CAGGTGTACA GCTTCTTTGC CTTCAAAAAG CGTGGTGGCT
GGTATGCTGT GCGCGGCCAA AGGACTGCAC AGGGGCAGTG TAGAGGAACA GGCCTTTCTA
CAGCAGGTCG CAGCCATACC CATGCTGTCG GTAGCCATAC CGCGATGCTT GTCTGCCAAT
GGCAAGGACT GGCTTTTGGC CGCTGGCCGT ACGGTGGACT TTCACACTGT TCAGGGCACT
CGTAAAGCTG CGGGCGGCAT CAAGGATTGC CACATCACCA CGCGGCACTA CCTGCACGAC
AGTTCTTTTG CCGTGTTTCT CAACGGCCCG TACAGGGTAC TCGAGGATGC TGCCAGGGCT
TTGCAAAATC CGGTGTGGGG GCTTTGGATA GGCCGCAAGT GCTGCATACC CAGTGCTCCT
GTATTTGGCG GACTGTTTTC CAGCGAGGCC GTGGCATTAA ACCATATGCT GGATGCTCCG
TTGGAATTCT TTACCCATGA GCGGGAGGTG CACAGCTTTG AAGACGGTAA CGACACGGTG
CCTGACCAGG CGGAAAGTTT TCTTTCTGCC GCTCGCCGGT TTGCTCCCCG ACGTGTCCTG
CGGGTGCGCG CACGGGTGCA TGGCGTACAG CGTGAAGATG TAGAAGAAAA ACAGCAACAG
GCGGTAATGA CTGATGCGCC TGATGTCTGA
 
Protein sequence
MCADVCCLAL RLQAPMLSFG NESRFNRRCT ASLPSKSVVA GMLCAAKGLH RGSVEEQAFL 
QQVAAIPMLS VAIPRCLSAN GKDWLLAAGR TVDFHTVQGT RKAAGGIKDC HITTRHYLHD
SSFAVFLNGP YRVLEDAARA LQNPVWGLWI GRKCCIPSAP VFGGLFSSEA VALNHMLDAP
LEFFTHEREV HSFEDGNDTV PDQAESFLSA ARRFAPRRVL RVRARVHGVQ REDVEEKQQQ
AVMTDAPDV