Gene Ddes_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0925 
Symbol 
ID7284602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1080107 
End bp1080730 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content56% 
IMG OID643581722 
ProductCRISPR-associated protein, Cse3 family 
Protein accessionYP_002479510 
Protein GI220904198 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTGGA TGACCCGCTT TATGGTGGAG CTGCCAGCCC TGCACCGCAA CAGGCTGAGC 
GACTGCTACG CCTGGCACAA GGCCATCTGG CAGTGTTTTC CCAACAGGCC AGACGCCAGT 
CGCGATTTCC TGTTCCGGCT GGATGAAGTT CCCGCAGGGA CTCTGGTGCA CGTGCTCAGC 
CCGCATGAAC CGCAGCGTCC TGATTTTTGT ACAGAGGACC ACTGGCAGAT CAAGGCTGTA 
CCGCCCTGTT TTCTGAAGTA CAACTGTTAC CGCTTTGATG TGATCTGCAA TCCTGGCCGC 
AAGGTAGAGG CCTTTACCAG TGATGGACAA CGCAAAAAAA ACAGCCGCCG TGAGGCAATC 
ATAAAACCGG ATGAGCAGAA CGCATGGCTT GACCGCAAAG CGGCGGCCAA CGGCTTTGAA 
GTCCTGCCCG GCATGCGTAG TATAGATCCC TCAACCAGAT ATTCCTTCAG AAAAGACCAT 
CGGTCGGGAA CGCATATCGG CGTGCGCTTC AGCGGTGTTT TGCGCGTTAC TCAGCGGGAC 
GAATTCTGCC GGGCATTCCA TAAGGGGCTG GGCAGTGCTC GCGGATTTGG TTTTGGCATG 
CTGCTTCTCA GCCCTGTGCG GTAA
 
Protein sequence
MTWMTRFMVE LPALHRNRLS DCYAWHKAIW QCFPNRPDAS RDFLFRLDEV PAGTLVHVLS 
PHEPQRPDFC TEDHWQIKAV PPCFLKYNCY RFDVICNPGR KVEAFTSDGQ RKKNSRREAI 
IKPDEQNAWL DRKAAANGFE VLPGMRSIDP STRYSFRKDH RSGTHIGVRF SGVLRVTQRD 
EFCRAFHKGL GSARGFGFGM LLLSPVR