Gene Ddes_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0896 
Symbol 
ID7284572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1044455 
End bp1045786 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content55% 
IMG OID643581692 
Productcarboxyl-terminal protease 
Protein accessionYP_002479481 
Protein GI220904169 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000020194 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTTC TTTTCCGTTC ACACATGTTT GCATTCCTTC TGCTCATTGG CGTTGCCGCG 
GCGTTTCCCG GCGTATCGTA CGGCGCTGAC GCAAAAGAGC CTGCCAAGGA AGCCCCCAAT
AAATTTGATG CCCTCAAACG CTTCAGCCAG GTTCTTGATC TGGTAGAGCG TTACTATGTA
CGCGACGTAA CTCAGGGCGA CCTCATCAAC GGGGCCGTCA AGGGCATGCT GCAAGGGCTT
GACCCCCACT CCACCTTCAT GAGCACAGAT GAATACAAAG AAATGCAGGA GACGACCTCC
GGCGAATTCT TTGGCGTGGG CATAGAAATC TCACAGGAAA ACGGCCAGAT TACCGTGGTG
ACGCCCATTG AAGATACCCC GGCCTTCCGC GCCGGCCTGC AGCCGGGCGA CATCATTCTG
TCCATCAACG GCCAGCCTGT CCAAGAACTG TCGCTTCAAG AAGTGGTTTC GCGCATCCGC
GGCCCCAAGG GATCTGAAGT GGAGCTGGTC ATCCTGCACA ACGACTCAAA AAACCCGCAA
ACTGTCCGTA TTACGCGCGA TGCCATTCCC CTCATCAGCG TCAAGTCCAA AAAACTTGAG
GACGGCTATT ACTGGATACG CCTCACGCGC TTTTCAGAAC GCACCACCGA TGAACTGAAA
GACGCGCTCA AGGCGGCAGC AAAAGAAAGC AAAGCCAATG GCGGCATCAA GGGTATTGTG
CTTGACCTGC GCAACAACCC CGGAGGCCTG CTTGACCAGG CCGTAAGCGT GGCCGATGCT
TTTCTTGAAA AAGGCACCAT TGTTTCCATC AAGGGGCGCC GCGAAAACAC AGAACGTGTG
TATTCGGCCA AAAAACAGAA CGACGATGTG CGTGTGCCTA TGGTGGTCCT GATCAATGCG
GGATCGGCCT CGGCGTCTGA AATTGTGGCC GGGGCGCTGC GCGACCAGAA ACGCGCCCTC
ATCATGGGTG AACGCTCGTT CGGCAAGGGG TCTGTGCAGA ATATCATTCC CCTTTCCGAT
GGTTCCGGGC TCAAGCTCAC GGTCGCCCTT TACTATACAC CCAACGGCAG TTCCATTCAG
GCCGAAGGCA TTGTGCCTGA CCTTGAAATC CCCTTTGAAG CGCCGCGTTC CGACGACAAG
GACAATCCGC GCCTGCTCCT GCGCGAGCAG GACCTGAATC GCCACCTTGA AACCAAGAAC
GACAAAAAGG CTCCCAAGGG GAAAAATACG GCCAATGATG CCCAGGAGCA GCTTGCACGG
GACAATCAGT TGCGCATGGG GCTGCAGATG GTCAAAAGCC TGCCCAAGAT GAGTGAAATC
AAGGCTCAGT AA
 
Protein sequence
MRLLFRSHMF AFLLLIGVAA AFPGVSYGAD AKEPAKEAPN KFDALKRFSQ VLDLVERYYV 
RDVTQGDLIN GAVKGMLQGL DPHSTFMSTD EYKEMQETTS GEFFGVGIEI SQENGQITVV
TPIEDTPAFR AGLQPGDIIL SINGQPVQEL SLQEVVSRIR GPKGSEVELV ILHNDSKNPQ
TVRITRDAIP LISVKSKKLE DGYYWIRLTR FSERTTDELK DALKAAAKES KANGGIKGIV
LDLRNNPGGL LDQAVSVADA FLEKGTIVSI KGRRENTERV YSAKKQNDDV RVPMVVLINA
GSASASEIVA GALRDQKRAL IMGERSFGKG SVQNIIPLSD GSGLKLTVAL YYTPNGSSIQ
AEGIVPDLEI PFEAPRSDDK DNPRLLLREQ DLNRHLETKN DKKAPKGKNT ANDAQEQLAR
DNQLRMGLQM VKSLPKMSEI KAQ