Gene Ddes_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0892 
Symbol 
ID7284568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1040143 
End bp1041129 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content63% 
IMG OID643581688 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002479477 
Protein GI220904165 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.915711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCCCG CTACGGATGC CGCCTGCCTG TCGCAGTCTG TTGCCGCTTC GCTGCTGGAA 
CTGCACAACG TATCGCGACA TTTTTCCATC AGCCGCGGCC TGTTCGCGGA GCAACGCATG 
CTGGTTGCCG TGGACGATGT AAGCCTGAGT CTTGCTCCGG GTGAAAGCCT GGGCCTTGTG 
GGTGAATCGG GCTGCGGCAA ATCTACTTTG GGGCGTCTGG CCTGCGGCCT GCTGCCACCT 
ACTGAAGGCC GCGTATTGCT GGACGGCAGG GAGTTGCCCC CTGCCGGTGC GGGCAGTTGG 
GCCTCCGGCC GGATACAGAT GGTTTTTCAG GATCCTTTTT CTTCGCTTAA TCCGCGTCGT 
TGTGTGCGAA CCTCCATTGC CGAACCCTTG GCCGCCCGCA ACCTGCCCCG CGCCGAACGA 
AACGATCTGG CTGACCGGAT GCTCGCCACC GTGGGCCTTG AGGGCATGGG GGGGCGGTAT 
CCCCACGAGT TTTCCGGTGG GCAACGCCAG CGCATTGCCG TTGCCCGCGC CCTGATCACC 
CGGCCCGATG TAGTCATCTG CGATGAACCG GTGTCAGCTC TGGATGCTTC GGTGCAGGCC 
CAGATTCTCA ATCTGCTTCG CGATGTGCAG GAGCATTTCG GCCCGGCCTA TCTTTTTATT 
TCTCACGATC TTGCCGTGGT GGGCTTTTTA TGCAGCCGTA TAGCGGTCAT GTATCTGGGG 
CAGATTGTAG AAGAGGCTCT GGCCGGGCAG CTTTTTTCCG GTGCGGCGCA TCCGTATACG 
CGTGCGCTCA TGGCGGCCAT GCCCAGCGGA GAAAGTGGGG GCCGTCTGGC AGAACCACTT 
GAGGGCGAAC TGCCCAGCCC GCTGGACCCG CCGGCCGGTT GCCGCTTTCA CCCGCGGTGC 
CCGCTGGCGC AGGATGTCTG CCGTAACGAG GCCCCGGTCT GGAAAGAGTG TGCGCCGGGC 
TGGCGCGTCC GCTGCTGGCT GGCCTGA
 
Protein sequence
MFPATDAACL SQSVAASLLE LHNVSRHFSI SRGLFAEQRM LVAVDDVSLS LAPGESLGLV 
GESGCGKSTL GRLACGLLPP TEGRVLLDGR ELPPAGAGSW ASGRIQMVFQ DPFSSLNPRR 
CVRTSIAEPL AARNLPRAER NDLADRMLAT VGLEGMGGRY PHEFSGGQRQ RIAVARALIT 
RPDVVICDEP VSALDASVQA QILNLLRDVQ EHFGPAYLFI SHDLAVVGFL CSRIAVMYLG 
QIVEEALAGQ LFSGAAHPYT RALMAAMPSG ESGGRLAEPL EGELPSPLDP PAGCRFHPRC 
PLAQDVCRNE APVWKECAPG WRVRCWLA