Gene Ddes_0891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0891 
Symbol 
ID7284567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1038932 
End bp1040050 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content64% 
IMG OID643581687 
Productnicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase 
Protein accessionYP_002479476 
Protein GI220904164 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACA GCACTTTTTC ATCTTCTTGT CCGTCCCCCT GGCTGGAACG TTTTTTCCCC 
GGCTTGCGTA TTGAACCACT GCGGCAGCAG GATATGGTTG CGGCCCAGGC CCATCTGGAC
AATCTTACCA AGCCCCGGGG CAGTCTCGGC AGGCTCGAGG ACCTGGCCCG CAGGATTTAC
GCCATGCGCC GGGGGCAGAC GCCTTTGAGC GTCAGCCCGG CTCTCATGCT GACAGTGGCT
GGCGACCACG GCGTGGCGGC GCAAGGTGTT TCACCTTTTC CACAGGCTGT GACGCGCCAG
ATGGTGCAGA ATTTTTTTGA TGGCGGCGCG GCCATCAATG TGCTGTGCCG CAGCACGGGT
ATGGATATGC TTGTTGTGGA CGCCGGGTGC GCGGGTGGTC CCTTTGCGGC GCACCCCATC
CTGCTTGACC GCCGCCTCGG CAACGGCACG GCAGACTTGA GCCTTGGTCC GGCCATGAGC
ATCGATGTCT GCCTGGCGGC CCTGCGCACG GGCATCGAAC TGGCCCATGA CGCCGCCGAC
AAGGGCTATC AATGTCTTGG CGTGGGTGAA ATGGGCATTG CCAACTCCAC TTCCGGCACA
GCACTTTACT GCGCCCTGCT GGGGCTTGAT CCCGAAGTCA TGGCCGGACC GGGAGCCGGG
TCGGATGCGG CCATGGTGCG CCACAAGGCC GAGGTTGTGC GCCGCGCTCT TGCCGTTAAT
GCAGGGCATC TGAGCGCTGG TGACCCGGTG GCTGTTCTGG CGGCCCTTGG TGGATTTGAA
ATTGCCGTCA TGAGTGGCGT CATGCTGGGC GCCGCCTCGC GCCGCCTGCC GGTGCTGGTG
GACGGCTTTA TCTGCAGTGC CGCATATGTG GCAGCTTTGC GCATATGCCC GACCCTGGGC
GATTATGCGG TGCTGGCCCA CGCTTCGGCC GAACAGGGGC ATGGACGCGC TTTGGCCCGG
CTTGAAACGG CCGCCACCGA CCACCGTCCT CTCCTGCATC TGGACATGCG GCTGGGCGAA
GGCACAGGGG GGGCCACTGC CTACGCGCTG CTGCGCTGCG CTGCGGACAT ATACAATGAT
ATGGCTACAT TCGGTGCAGC CGGAGTAGAT GCGTGCTGA
 
Protein sequence
MNDSTFSSSC PSPWLERFFP GLRIEPLRQQ DMVAAQAHLD NLTKPRGSLG RLEDLARRIY 
AMRRGQTPLS VSPALMLTVA GDHGVAAQGV SPFPQAVTRQ MVQNFFDGGA AINVLCRSTG
MDMLVVDAGC AGGPFAAHPI LLDRRLGNGT ADLSLGPAMS IDVCLAALRT GIELAHDAAD
KGYQCLGVGE MGIANSTSGT ALYCALLGLD PEVMAGPGAG SDAAMVRHKA EVVRRALAVN
AGHLSAGDPV AVLAALGGFE IAVMSGVMLG AASRRLPVLV DGFICSAAYV AALRICPTLG
DYAVLAHASA EQGHGRALAR LETAATDHRP LLHLDMRLGE GTGGATAYAL LRCAADIYND
MATFGAAGVD AC