Gene Ddes_0877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0877 
Symbol 
ID7284553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1026130 
End bp1026894 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content52% 
IMG OID643581673 
Productglucose-1-phosphate cytidylyltransferase 
Protein accessionYP_002479462 
Protein GI220904150 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID[TIGR02623] glucose-1-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCA TTATTATGTG TGGCGGCAAG GGAACGCGCC TGCGCGAAGA AACCTCGGTC 
AAACCCAAAC CTATGGTTGA GATCGGCGGA CGGCCCGTGC TGTGGCACAT CATGTCCATC
TATGCGCGTT TCGGCTTCAA GGACTTTGTG CTGCCCCTGG GCTACAAAGG CCAGGTCATA
AAGCAATATT TTCACGATTA TAACATCCGC AACACAGATT TTACCGTTGA TCTGAAAAGC
GGGTCCATCA CCACATATCC CAGCCATATA GAAGACTGGC GCGTCACCCT GTGCGATACG
GGTGAAGAAA CCCTCAAGGG CGGACGCCTC AAGCGTGTGG CCAAGTATAT CGATACCGAC
CGTTTCATGG TCACCTATGG CGACGGTGTG GCGGATATAG ACCTGAACAA ACTTATAGAA
TTTCACAAAC AGTCCGGCAG CATAGGAACA TTTACCGGCG TGCGTATGCC CTCACGTTTC
GGCACTGTGC GTACCGATAA TCAGGGCAGG ATACTCTCCT GGGAAGAAAA GCCCGTGCTG
GATGAATACA TCAACTGCGG TTTCTTTGTC TTCAAGCGCG AGTTTCTGGA CTACCTCAGC
GAAGATGAAA ACTGCGACCT TGAAAAAGAA CCCCTGCAGC GGCTGGCGGC AGAAGGGCAG
CTTTCCATGT ATCCACATCC CGGCCAGTGG CAGTGCATGG ATACCCTGCG CGACTCCATA
AAGCTCAACG AAATGTGGGA TTCCGGCCGT GCATTCTGGG TATAA
 
Protein sequence
MKVIIMCGGK GTRLREETSV KPKPMVEIGG RPVLWHIMSI YARFGFKDFV LPLGYKGQVI 
KQYFHDYNIR NTDFTVDLKS GSITTYPSHI EDWRVTLCDT GEETLKGGRL KRVAKYIDTD
RFMVTYGDGV ADIDLNKLIE FHKQSGSIGT FTGVRMPSRF GTVRTDNQGR ILSWEEKPVL
DEYINCGFFV FKREFLDYLS EDENCDLEKE PLQRLAAEGQ LSMYPHPGQW QCMDTLRDSI
KLNEMWDSGR AFWV