Gene Ddes_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0859 
Symbol 
ID7284535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp1006587 
End bp1007837 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content65% 
IMG OID643581655 
Producthypothetical protein 
Protein accessionYP_002479444 
Protein GI220904132 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000297869 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTCCC CGCAGCGCAG GTTGCTTCTT TCATTTTTTC CCGTAACAGT TCTGCTCGCC 
GCCGCGTCGG CCCTGTGCCT TGCGGCGCCG GGCGCGCGGG CGGCGGCCAT GGCCGCTGCT 
GACTCTTCAG GCGGTTACGC CGGAAAAATG CTCAATAAGG TTGTGGAAAT ATGGGCGCCC 
CCACCGGCGC TCAAGGGTGA TTTTCAGGTA CAGATAGAAG TGGCCCTTGA CGGTACAGGC 
CACGTACAGG ACTGCAGTCC GGTGCGCCCT TCCGGTATGG AAGCCCTGGA CAGCTCCGCC 
TGCGGCGCGG TGCGCCAGAT CGGCAATTTC GGCAAAACGC CCCACGGTAA AGCCCTTGAG 
GTGCACCTGT CTTTCTGGAC AGGCATGCCC AAGGGTAAGG TGCGGCCTGC GCCCATTGAT 
GATGTGGAAG CCATGCGCCA GGAAGAGCGT GCGCGGACCA AGGCCGAAGC GGCCATGAGC 
GACAGCCGTG CGGCCAGTGC CGAAGAGCGC GCCCGTGAAC GGGCCGAAGA GGCCGCCAAG 
GCCACCGGCA TGGACCTGCC CGCCGTCAGG CCCGCCCCCG TGGCCCCGGC ATTGGTTCAG 
CCTGTCCCGG CTGACCCCGG CTCGGCAGGC GGCAAGGGCA GGAAAAAGAC CGGCAAGAAC 
GCCCGGGTAG TGGGCTACAG CCAGGACAGT TCCCCGGCCA CGGTGGCTAT CGGCGCTTCT 
GGAAGCGCCG GGAACGGATC TGCGGCTGTG ACGAAAAAGA CCCCGCCCCT GATCATCGCC 
CCGACGCCCC TGCCCGCGCA ACCTTCGCCA GAAGCCGCCG GCACGACGGC GGACACAGGC 
GCAATGGAAG GCGCGGTTCA GGAAACGTCC GCAACAACTG CCAGCCCTGT GCCCACGGCG 
GCGCAACCCG CAACCCAGCC GGACGAGCCG CGCATCTACG GGCCGGACAA CAGGGCGCAG 
GACCAGTATG GAAAAAAGCA CGGCAAATAT TTTTCCAGCC TGAGCTGGCA GCTTGCCAAC 
GCCATCATCA TACCGGTTGA AACGCCGCCC GGGACCTATT ATCCTACTGT ACGGCTGACG 
GTGAACCCCA CCACCGGAGC TATTGAAGAC GTCGCTTTTC TTGAAAAAAG CGGCGACAGG 
CATCTTGAGC CGTTCGTGCG CCGGGGCATC CGGAAGGCAG GCAGCATTCC GCCGCCACCC 
GGGGACCTTG GCGCAACGCT GGACATAACT CTTACACTGG TGCGCCGCTA G
 
Protein sequence
MPSPQRRLLL SFFPVTVLLA AASALCLAAP GARAAAMAAA DSSGGYAGKM LNKVVEIWAP 
PPALKGDFQV QIEVALDGTG HVQDCSPVRP SGMEALDSSA CGAVRQIGNF GKTPHGKALE 
VHLSFWTGMP KGKVRPAPID DVEAMRQEER ARTKAEAAMS DSRAASAEER ARERAEEAAK 
ATGMDLPAVR PAPVAPALVQ PVPADPGSAG GKGRKKTGKN ARVVGYSQDS SPATVAIGAS 
GSAGNGSAAV TKKTPPLIIA PTPLPAQPSP EAAGTTADTG AMEGAVQETS ATTASPVPTA 
AQPATQPDEP RIYGPDNRAQ DQYGKKHGKY FSSLSWQLAN AIIIPVETPP GTYYPTVRLT 
VNPTTGAIED VAFLEKSGDR HLEPFVRRGI RKAGSIPPPP GDLGATLDIT LTLVRR