Gene Ddes_0857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0857 
Symbol 
ID7284533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp1004545 
End bp1005012 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content57% 
IMG OID643581653 
Productpeptidoglycan-associated lipoprotein 
Protein accessionYP_002479442 
Protein GI220904130 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000523751 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCT ACGCTCTTAT TCTCGCTTTG GTCATGGCTC TGGCTGCCGG TTTTGGTTGT 
GCAAAGAAAA CCACTGGCGA ACCTGGCTAT GATGATGGCA TGACCCCTGA AATGCGCGCT 
GCCGTCCAGC AGATCACTGA TGGCCGCGTG TACTTCGCCT TCGACAAATT CAACGTTGAA 
AACCAGTACA AAGAAATGCT GAAGCAGAAG GGCGACCTTC TGAAGCAGTA CCCCGCCATC 
CGCGTTCGCA TCGAAGGCAA CTGCGACGAT CGCGGCACCC AGGAATACAA CCTCGCCCTT 
GGCGAGCGCC GCGCCCGCGC TGCGTATGAG TACCTGGTCA TGATGGGCGT GAACCCCAAC 
CAGCTTGAAA TGATCAGCTA CGGCAAGGAA AACCCCGCCG TGCAGGGTAA CAACGAAGCC 
GCCTGGGCCA AGAACCGCCG CGACGACTTC CGCGTTATCG CTCACTAG
 
Protein sequence
MKRYALILAL VMALAAGFGC AKKTTGEPGY DDGMTPEMRA AVQQITDGRV YFAFDKFNVE 
NQYKEMLKQK GDLLKQYPAI RVRIEGNCDD RGTQEYNLAL GERRARAAYE YLVMMGVNPN 
QLEMISYGKE NPAVQGNNEA AWAKNRRDDF RVIAH