Gene Ddes_0854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0854 
Symbol 
ID7284529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1001155 
End bp1001940 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content55% 
IMG OID643581650 
ProductGntR domain protein 
Protein accessionYP_002479439 
Protein GI220904127 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00310833 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACCG TAAATACGAA CAACAGCAGC ACTGAAAGGC TGCAAGGCAG ACGGCGCAGC 
ATACAGCGTC CGCGTGTGCA TGTTGAGGTG CTGTCCTGTC TGTTGGAAGA TATACAGTCC 
GGCGTATACC AGGTAGGGCA GAAACTGCCG TCCGAGCGCG AGCTTATGGA AGAATTTGGT 
GTCGGCCGTC CGGCTGTGCG TGAGGCCTTG TCGGCGCTGG CGCGTATGGG ACTTATAGAA 
GTTTCGCCCG GTATGCGGGC GCGGGTTTGC AGGCTTACAC TCAACCCGCT GTTGCGCGAA 
ATGCGCGCCA CTATGGAAAT ATACTCGAGC ACTCATGACG GCTGGAGGCA GATGCACGAA 
CTGCGGCAGT TCTTCGAGAC GGCCGTGGCC CGGCGTATGG CGCGCCATAT GACGGATGAA 
CAGATGGTCG AGCTTGAGCG CATACTGCAA AAACAGCGCG GTTTGCTGGA CGATTCGGCC 
ATACGGGAAT TTGCCGAGGC TGACATCGAG TTTCACCGTT ACCTTGTGAA CTGTGTCGGG 
AACAATTTTC TGGATATTGT TTCCGACGGC TTTGCAGGCT GGTTGATTAC TCCCCTGTAC 
GCCTCCATGC AGGTACGGCA GCAGAGCGAA CTGGCCTATG AAGCTCATGT GCGCATTTTT 
GAAGCCCTGA AAAAGCGTGA TGCCGATGCT GCGGAAGAAG CCATGCGGGC GCATCTGGAA 
GAGATGCGCG GTATTTATCA GGTGGATGTC ATGTCAGGCA CGGAAAAAAA GCCGGGCAAG 
ATGTAA
 
Protein sequence
MTTVNTNNSS TERLQGRRRS IQRPRVHVEV LSCLLEDIQS GVYQVGQKLP SERELMEEFG 
VGRPAVREAL SALARMGLIE VSPGMRARVC RLTLNPLLRE MRATMEIYSS THDGWRQMHE 
LRQFFETAVA RRMARHMTDE QMVELERILQ KQRGLLDDSA IREFAEADIE FHRYLVNCVG 
NNFLDIVSDG FAGWLITPLY ASMQVRQQSE LAYEAHVRIF EALKKRDADA AEEAMRAHLE 
EMRGIYQVDV MSGTEKKPGK M