Gene Ddes_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0826 
Symbol 
ID7284501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp968438 
End bp969310 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content61% 
IMG OID643581623 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002479412 
Protein GI220904100 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.456619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAACTG AGACGCGCCT TCCCCAAAAA CCCCGCAGCT TTGCACAGCG CCTGCTTTAC 
CCTTTCAGAC GCGGCACGGG ACCGGCGATG CAGGAGCCGG TGGGCTTTTT TACCGATACC
TCGGTATGTA TCGGCTGCAA GGCCTGCCAG GTGGGCTGCA AGCACTGGAA CATGCTGCCA
GGCCTTGAAC CACGACTTTC TGGCCGCAGC TACGACAACA CCCTGGAACT TTCCGCCCGC
ACATGGCGGC ATGTAAAGTT CGCCGAGGTC ATTGATACCG ATATTCCGGC CAATAACCGT
CAGGGCATGC ACTGGCTTCT CGCCAGCGAC AGTTGCAAGC ACTGCGACGA TGCCCCCTGC
ATGCGGGCCT GCCCCACGGG GGCGCTTGTC CGCACTGAAG TGGGCGGCGT GTACCCGCAG
GCAGACATCT GCAACGGCTG TGCCTCATGC GTTGCGGCCT GCCCCTTTGG CGTTATTGCC
AGAAATGAGA AAAGCGGCCA CTCGCACAAG TGCACCTTCT GCCTTGACCG GGTGCGTGAC
GGCCTGCAGC CGGCTTGCGC CAAAACCTGC CCCGCTGCTT CCATACGCTT CGGCAGGCTT
GAAGACATGC GCAATGCCGC CCGCAACCGC CTGGCCCACC TGCGGGCACA GGGTGTGAGC
AATGCCCGCC TTTACGGCCT TGAACCCACA GAAAACTATT CGTCACTGCA CAATATTTTC
CTGCTGCTGG ACAGGCCCTC CACCTATGGC CTGCCCGAAA CTCCCCTGCA TCCCGCCCGC
CGTCTCAAGG GAGACTATAT CCGCGCTGCC GCCGGAGTGG TTCTCGGCAT TGCCATACTG
GGCGCGTCAG TCATTTTCGG AGGTGTCCTG TAA
 
Protein sequence
MITETRLPQK PRSFAQRLLY PFRRGTGPAM QEPVGFFTDT SVCIGCKACQ VGCKHWNMLP 
GLEPRLSGRS YDNTLELSAR TWRHVKFAEV IDTDIPANNR QGMHWLLASD SCKHCDDAPC
MRACPTGALV RTEVGGVYPQ ADICNGCASC VAACPFGVIA RNEKSGHSHK CTFCLDRVRD
GLQPACAKTC PAASIRFGRL EDMRNAARNR LAHLRAQGVS NARLYGLEPT ENYSSLHNIF
LLLDRPSTYG LPETPLHPAR RLKGDYIRAA AGVVLGIAIL GASVIFGGVL