| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0824 |
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| Symbol | |
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| ID | 7284499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 965189 |
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| End bp | 966397 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643581621 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_002479410 |
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| Protein GI | 220904098 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.325184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAA TCTCCATTCA AAACATTTCT AAAGTCTTCG GGCCACAGCC GGACCAGGCG
CTTGAACTGG CAGCCGAAGG CGCCTCACGC GCGGACATTC TGCGAAAAAC CCGCACCACA
GTGGCCCTGC GCGACATATC CCTTGATATT ACAGACAGCG AACTGCTCGT CATTATGGGT
CTTTCCGGCA GCGGCAAATC AACCTTGCTG CGCTGCCTCA ACGGACTGAT CATGCCCAGC
ACCGGGCGCA TCCTTGTGGA CGATGCGGAT ATAACCACAA TGAATGCCAA AGGGCTGCGC
CATGTGCGCC AACGCTGCTT CGGCATGGTG TTTCAGAATT TTGCGCTTTT TCCTCATCGC
ACGGTATTGC AGAATACAGC CTTCGGCCTT GAGGTCATGG GCGTATCTGA AACCCAGCGC
CTGAAAAAAA GCGAAGAAAT GCTTGAGCGC GTCGGCCTTG CACAGTGGAA GAACTCCTAC
CCCGGCGAGC TTTCCGGGGG CATGAAGCAG CGTGTGGGCC TGGCCCGTGC CCTGGCTCTT
GAGCCGGAGG TGCTGCTTAT GGACGAAGCC TTCAGCGCCC TTGACCCCCT TATCCGGCAG
GAAATGCAGG ACGAGTTGCT GTCGCTTCAG GAAGACATTC AAAAGACCAT TGTTTTCATC
ACTCATGACC TTAACGAGGC CTTCAAGCTC GGCGACCGCA TTGTCCTGCT GCAGGACGGA
GCCGTTGTGC AGACAGGTAC CCCCGAAGAA ATCCTTCAGG CCCCGGCCAA CGACTATGTG
GCCCGTTTTG TCGCCTCGGC CGACGCCTCG CAGGTACTGA CCGCAGCCAG CGTCATGAAG
CGCTCCGAAG ATACCGCGGT GCTTGGTCTG GATGGCCCGC GCGCTGCCTT GCGCAAAATG
CGCGTACACT CCATTGCTTC GCTTTTTGTG CTGGACCGAC ACCGCCGTTT TGTGGGCATC
CTTAACGCCG ATGACGCCGA AGCCATGATC AGCGAGGGCC GTTCGGACCT TACTGAAATA
ACCCGCACAG ACATCGTGAC CGTCACACCT GACACCCCCG TTACCGAACT TGTGCCGCTC
ATGGCCGAAC TGCCCTACCC GTTGGCTGTG GTAGATAACC GCCAGCGTTT ACAGGGTGTT
ATCGTGCGTG GACTGTTACT GGGCGCTCTG GTGGAACATA ACGACAGGAG AGGCGCGCAT
GCTGCCTAG
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| Protein sequence | MAKISIQNIS KVFGPQPDQA LELAAEGASR ADILRKTRTT VALRDISLDI TDSELLVIMG
LSGSGKSTLL RCLNGLIMPS TGRILVDDAD ITTMNAKGLR HVRQRCFGMV FQNFALFPHR
TVLQNTAFGL EVMGVSETQR LKKSEEMLER VGLAQWKNSY PGELSGGMKQ RVGLARALAL
EPEVLLMDEA FSALDPLIRQ EMQDELLSLQ EDIQKTIVFI THDLNEAFKL GDRIVLLQDG
AVVQTGTPEE ILQAPANDYV ARFVASADAS QVLTAASVMK RSEDTAVLGL DGPRAALRKM
RVHSIASLFV LDRHRRFVGI LNADDAEAMI SEGRSDLTEI TRTDIVTVTP DTPVTELVPL
MAELPYPLAV VDNRQRLQGV IVRGLLLGAL VEHNDRRGAH AA
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