| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0823 |
|---|
| Symbol | |
|---|
| ID | 7284498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 964357 |
|---|
| End bp | 965199 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643581620 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002479409 |
|---|
| Protein GI | 220904097 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.54971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCTA GACTCCCCTT GGCCGGTTAT ATTGACAGCG GCGTGGAGTT TCTGGTGGAG
CAGTTTTCCG GCGTTACCCG CGCCGGGTCC GCAATCATGC TTGCCCTGCT GGACCGTTTT
GAAGAATTTC TGCTGCTGCC GCCCCCGTGG CTCTTTATTC TGCTTCTGGC AGCTCTGGCC
TGGTGGGTAA CGCGCCGCCC GGGACTGCCC GTATTCGTGG CTCTGGGCTT TGCCCTTCTG
TGGAACCTGG GGCTGTGGAC GCCCACCATC AGCACTCTGG CCCTGGTGCT TTCGGCCACC
CTGCTTTCCG TGCTGGTAGG CGTACCCTGC GGCATTCTTG CGGCCATGAG CCCTGTGGCA
CGCAAAATTG TCATGCCCGT GCTGGACGTC ATGCAGACCA TGCCAGCCTT TGTGTATCTT
ATTCCGGCCA TTCCCTTTTT CGGCATCGGC AAGGTCAGCG CGGTGGTAGC CACGGTCATC
TTTTCAGTGC CTCCGGCCAT ACGCTTTACC TGCCTGGGCA TACAGCAGGT TCCCCGCGAT
CTTGTGGAGT GCACCGAGGC CTTTGGCGCA ACCCGCATGC AGCGTCTGTA TAAGCTGGAA
CTGCCCCTGG CCATGCCCAC CATTGTCGCA GGCGTAAACC AGACAATCAT GCTGGCCCTT
TCAATGGCCG TCATCGCGGC CATGATCGGC GCGCGCGGCC TGGGCGGCGA GGTATGGAAG
GCCATTCAGC GCCTCAACAT CGGCATGGGC TTTGAAGCCG GGCTTGGCAT CGTTATTGTC
GCCATTACCC TTGACCGCCT CTTCCGTGCG CTGGCGCAAA AAAGTTCCGG CAAGGCCCAT
TAG
|
|---|
| Protein sequence | MLPRLPLAGY IDSGVEFLVE QFSGVTRAGS AIMLALLDRF EEFLLLPPPW LFILLLAALA
WWVTRRPGLP VFVALGFALL WNLGLWTPTI STLALVLSAT LLSVLVGVPC GILAAMSPVA
RKIVMPVLDV MQTMPAFVYL IPAIPFFGIG KVSAVVATVI FSVPPAIRFT CLGIQQVPRD
LVECTEAFGA TRMQRLYKLE LPLAMPTIVA GVNQTIMLAL SMAVIAAMIG ARGLGGEVWK
AIQRLNIGMG FEAGLGIVIV AITLDRLFRA LAQKSSGKAH
|
|---|
| |