Gene Ddes_0779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0779 
Symbol 
ID7284453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp913042 
End bp913998 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content57% 
IMG OID643581575 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002479365 
Protein GI220904053 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTCC GCAAACGTAT ACTGGTCACG GGCGGTTCGG GCTTTCTCGG TTCGCACCTG 
TGTGAAAGAC TGCTCAACGA GGGACATGAA GTCCTTTGCG TGGACAACTT CTTTTCCAGC
GCCCGCGCCA ATGTGGAGGA TTTTCTCGAT AACAGAAGAT TCGAGCTTAT CCGCCACGAT
GTGACCTTTC CCCTGTATGT GGAAGTGGAC GAAATCTACA ACCTCGCCTG CCCGGCCTCG
CCCATTCACT ATCAGCACGA CCCGGTGCAG ACCATCAAGA CCTGCGTTCA CGGGGCCATC
AATATGCTGG GGCTGGCCAA GAGGCTCAAG GCGCGCATCT ATCAGGCGTC CACCAGTGAA
GTGTACGGCG ACCCCGAAAT ACACCCGCAG ACCGAGGACT ACTGGGGGCA TGTGAACCCC
AACGGCATCC GTTCGTGCTA CGATGAAGGC AAGCGCTGCG CCGAAGCCCT GTTTTTCTCT
TACTGGCGCC AGGGCGGCCT GCCCATCAAG GTGGGGCGCA TCTTCAATAC CTACGGACCC
AAAATGCATC CCAACGACGG GCGCGTGGTA TCCAACTTCA TCATTCAGGC GCTCAAGGGC
CAGCCCATCA CCATTTACGG AGACGGCAGC CAGACGCGCT CTTTCTGCTA TGTGGATGAC
CTGATCGAGT GCATGGTCCG CTTCATGGCT TCGCCCGAAG ACTTCATCGG CCCGATGAAT
ATGGGCAACC CCGGCGAATT CACCATTCGC GAACTGGCAG AAAAGGTCGT GGACATGACC
GGCAGCAAAT CCGTGATCAG TTACGAACCG CTGCCCGGTG ACGACCCCAA ACAGCGGCGG
CCCGACATTA CGCTGGCCCG CGAAAAACTC GGCTGGGAGC CGCAGGTCAA GCTGGAAGAC
GGTTTGAAAA AGACCATCGC CTACTTTGAC AGCATGTTAA AACTGGGCAT GGCCTGA
 
Protein sequence
MHLRKRILVT GGSGFLGSHL CERLLNEGHE VLCVDNFFSS ARANVEDFLD NRRFELIRHD 
VTFPLYVEVD EIYNLACPAS PIHYQHDPVQ TIKTCVHGAI NMLGLAKRLK ARIYQASTSE
VYGDPEIHPQ TEDYWGHVNP NGIRSCYDEG KRCAEALFFS YWRQGGLPIK VGRIFNTYGP
KMHPNDGRVV SNFIIQALKG QPITIYGDGS QTRSFCYVDD LIECMVRFMA SPEDFIGPMN
MGNPGEFTIR ELAEKVVDMT GSKSVISYEP LPGDDPKQRR PDITLAREKL GWEPQVKLED
GLKKTIAYFD SMLKLGMA