| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0773 |
|---|
| Symbol | |
|---|
| ID | 7284447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 905273 |
|---|
| End bp | 906037 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643581569 |
|---|
| Product | NADH ubiquinone oxidoreductase 20 kDa subunit |
|---|
| Protein accession | YP_002479359 |
|---|
| Protein GI | 220904047 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3260] Ni,Fe-hydrogenase III small subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.22855 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGCA TCATCAAGGA ACGCATTCAT CAGAAATACC GCACGCTGGA CTATCCACAC
CAACAGCCCA CACTCTCGCC CCGGTACATG GGCCGTCCAA GCCTGATCCC TGTGGATTGC
GGTGACTGCC GCGCCTGTTA TGCGGCCTGC CCCACTGCCG CCCTGTTGCC CACAGAGGGC
GTACCCGGCA GTACGCCAAC ACTGGATATG GGCCGCTGCA CCTTCTGCGG AGCCTGCCGC
GCTGCCTGCC CCAAGCAGGC CATCACGTTT ACGGGTGAAC ACCGCATGGC GGCCTTCAGG
CGCGAAGATC TGCTGATAGT ACCCGGAAAA CCTGTGACGC AGCCCGCAAC GCCCCCTGTG
CCGGGTAAAT TTGCCATATT CAGGCGTTCC CTCAAGCTGC GTCAGGTGAG CGCTGCGGGC
TGTAACGCCT GCGAAGCCGA TTGTAACGTG CTCGGAACCC TTGTGTTTGA CCTGCCGCGC
TTCGGTATTG ATTTTGTCGC TTCGCCACGA CACGCCGACG GCATCGTGCT TACCGGTCCT
GTTTCTGAAA ACATGCGGCT GGCAGCTATT GATACATATA ACGCCACGCC GGAACCACGC
CTCGTGGTGG CTGTGGGGGC CTGCGCCATA TCGGGCGGGC TTTTCCGCGA TGCCCCACAG
TGTAATAACG GCATTGCAGA TATTTTGCCC GTGGACCTTT TTGTTCCGGG CTGCCCACCC
AACCCCTGGA CTATTCTGGA CGGTTTGCTA ATGTTGCGGG AATAA
|
|---|
| Protein sequence | MLRIIKERIH QKYRTLDYPH QQPTLSPRYM GRPSLIPVDC GDCRACYAAC PTAALLPTEG
VPGSTPTLDM GRCTFCGACR AACPKQAITF TGEHRMAAFR REDLLIVPGK PVTQPATPPV
PGKFAIFRRS LKLRQVSAAG CNACEADCNV LGTLVFDLPR FGIDFVASPR HADGIVLTGP
VSENMRLAAI DTYNATPEPR LVVAVGACAI SGGLFRDAPQ CNNGIADILP VDLFVPGCPP
NPWTILDGLL MLRE
|
|---|
| |