Gene Ddes_0733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0733 
Symbol 
ID7284407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp859263 
End bp862514 
Gene Length3252 bp 
Protein Length1083 aa 
Translation table11 
GC content62% 
IMG OID643581529 
Productacriflavin resistance protein 
Protein accessionYP_002479319 
Protein GI220904007 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTTT CCCGCATTTT TATTCTCCGG CCCATAGCCA CGTCTCTGCT CATGGTGGCC 
CTGCTTCTTT CCGGCCTGCT GGGCTATCGT TATCTGCCCG TGGCGGCCCT GCCACAGATC
GATTACCCCA CCATCCAGGT GCAGACCCTC TACCCGGGGG CTTCGCCCGA TGTGATGGCC
TCGGTGGTGA CCGCGCCGCT GGAGCGCCAG TTCGGCACTA TGTCCGGCCT TGTGCAGATG
AGTTCCCTTT CTTCGGCCGG GGCTTCGGTC ATTACCCTGC AGTTTGACCT GTCCATGGCT
CTTGATGTGG CCGAGCAGGA AGTGCAGGCG GCCATCAACG CGGCCGATAA TCTGCTGCCC
GCAGACCTGC CCACGCCGCC TGTTTACAAC AAGGTAAACC CGGCGGATCC GCCGGTCATT
ACACTGGCGG TAGTCAGCGA CGCCATGCCC CTGACCCGCC TTGAAGACCT GGTCGACACG
CGCATGGCCC AGAAAATTTC ACAGTTGCCG GGCGTCGGTC TGGTCACCCT GTCGGGGGGG
CAGCGCCCGG CCGTGCGCGT GCAGATGAAT CCCAGGGCTT TGGCCAATGC GGGCCTCACC
CTGGCCGATG TGCGCACTGC CATTGCAAAG GCCAATGTCA ATGACGCCAA AGGCAGCTTT
GACGGCCCGG AGCGCGCGAG CACCATTGAT GCCAATGATC AGCTTGCCTC GGCCGAGGAA
TACGCCCGTG CCATCATAGG CTACAAGGAC GGCGCGCCCC TGCGCCTGCA AGATGTGGCC
GAGGTGGTGG AAGGGGCTGA AAATGCACGT CTGGCGGCCT ATGTGGCGGG GCAGGGCCTG
GGCTTTCGCC CGGCCATCGT GCTTTCCGTG CAGCGCCAGC CCGGCGCCAA CGTCATCGGC
GTGGCCGACA GCGTGACGCG GCTTCTGCCC GTATTGCAGC AAACCATGCC CGGCAACGTC
GAGGTGCGCG TGGTGACGGA CCGCACCACC ACCATCCGCG CCACGGTGCA CGACGTGCAA
CTGGAACTGC TGCTGGCCGT GGGCCTTGTC ATCTGGGTCA TCTGGCTGTT TTTGCGCAAT
GCGCAGGCCA CGATCATTCC GGCGCTGGCC GTGCCGCTTT CGCTGGTGGG GTCGCTGGGC
GTCATGCATC TTGCGGGCTA TTCCCTCAAC AACCTTACTC TTATGGCTCT TGTTATCGCC
ACAGGCTTTG TGGTGGACGA TGCCATTGTG GTCATAGAAA ATATTTCCCG CTATCTCGAG
AAGGGCATGC GCCCGCTTCA AGCCGCGCTT ACGGGCGCGG GGCAGATCGG CTTTACCATC
ATATCCCTTA CCGTTTCGCT GGTGGCCGTG CTTATTCCCC TGCTTTTTAT GGGGGATGTT
GTGGGGCGGC TTTTTCGTGA ATTCGCCGTT ACCCTGGCCG TGACCATTCT TATTTCCGCA
GTCATTTCAC TCACGCTCAC GCCCATGCTG TGCGCGGTCA TGCTGCGGCC AGCGCGCTCT
GCGGACCGTA AAGGTGAAGG GCGCTTTTTT GTCCGGCTGC TTGTCTGGTA CGAGCACCGG
CTTGACTGGG TGCTGGCGCA TCAGGGCCTG ACCCTGGCCG TGGCCGTGGG TACTCTGGCG
CTTACCGTGC TGCTTTACAT TGTCGTGCCC AAGGGCTTTT TTCCCGTGCA GGATACGGGC
GTTATCCAGG GCATGGCCGA GGCTCCGCAG GACACCTCCT TCAAGGCCAT GGCCGGTCGC
CAGCGCGAAC TTGCCGAAGT GATTCTTGAA GATCCGGCCG TGGAAAGCGT GGTTTTTTTT
GTGGGAGTGG ACGGCATCAA CCAGACCATG GCCACCTCAC GCCTGACCAT AGAGCTGCGC
CCGCTGGCCG ATCGGGACGC CCGCGCTCCG GCCATTGCCC GACGCATTAT GGACAGGGCC
GCGTCCCTGC CGGGCATGAC CCTGTATCTG CAGCCGGTGC AGGACCTGAC CATTGAAGAC
CGTGTTTCCC GCAGCCAGTA CCAGTTGACG GTGGAGGCGC TGGACAGGGC GCAACTGGAC
ACCTGGGCGC GGCGCATGGT TGAGGCCCTC AGGCAGCAGC CCGAACTGGA GCTTGTGACC
AGCGACTATC AGGCTCCGGG CCGCATGGCC TGGCTCAACA TCAATCGCGA CGCCGCCGGA
CGGCTCGGCA TCAGCATGGC GGACATAGAC AACGCCCTGT ATGACGCCCT GGGCCAGAGG
CTGATTTCCA CCATCTTCAC CCAGACCAAC CAGTACAAGG TTGTGCTTGA GGTGGCCCCG
CGCTTTCGGC AGGGTCCCGG AGACATGGAA AACATCTACG TCAAGGGCGG TGACGGCAAG
CCGGTGCCGC TGACGAGCAT CGCCACCATT GAGGAACGGC CCACCCAGCT TTCCATTGCG
CGGCAGGGGC AGTTTCCCGT AGCCACCATT GCTTTCAATG TGGCGCAGGA TTCCTCGCTG
GGGGCGGCTG TGGCTGCTGT CAACAGTACC TTTGAGCATC TTCAGGTTCC GGATTCGCTG
CGCATCCAGT TTCAGGGGGC CACCCAGGCT TTCATGGCGT CCACCAATAA TCAGGTCTGG
CTTATCCTGG CGGCCATTGT GACCATGTAT ATTGTTCTGG GCGTGCTGTA TGAAAGCTAT
ATTCACCCGG TAACCATTCT TTCCACCCTG CCGTCGGCCG GAGTGGGGGC CTTGCTGGCG
CTCATGCTGG CCGGTATGGA ACTTGGGGTT GTGGGTATTA TCGGCATTAT CCTGCTTATC
GGTATTGTTA AAAAAAATGC CATCATGATG ATCGACTTTG CGCTGGATGC CGAGCGCAAT
GAAGGCAAGG AGCCGCTGGC GGCCATACGG CAGGCGTGTC TGCTGCGTTT GCGTCCCATT
CTCATGACGA CCATGGCGGC CCTGCTCGGC GCGTTGCCCC TCATGCTCGG CTGGGGCATG
GGCGCCGAAC TGCGGCGGCC TCTGGGCGTG ACCATGGTGG GCGGCCTGAT CGTCAGTCAG
GTGCTGACGC TCTTTACCAC CCCGGTGATA TACCTGTGGT TCGATCGTCT GAGCCGCCGG
GTGCGCGGCA GGGGGGCGGC AGCTGCGGGT AGTGGCGGGG CTGCATCTGA TGCAGAAGAT
ACGCTGGATG GGGGAAATGG CCTTCATGAG GCGGTCGAGC CGGTGAACGT CTGGGGGGAC
GCATCGGGGG GCGATGGGGC GGCTGACGTC CCTGCCCGCG GAAGCGCCAT GCCGGGCGGG
AGCAGGACAT GA
 
Protein sequence
MNLSRIFILR PIATSLLMVA LLLSGLLGYR YLPVAALPQI DYPTIQVQTL YPGASPDVMA 
SVVTAPLERQ FGTMSGLVQM SSLSSAGASV ITLQFDLSMA LDVAEQEVQA AINAADNLLP
ADLPTPPVYN KVNPADPPVI TLAVVSDAMP LTRLEDLVDT RMAQKISQLP GVGLVTLSGG
QRPAVRVQMN PRALANAGLT LADVRTAIAK ANVNDAKGSF DGPERASTID ANDQLASAEE
YARAIIGYKD GAPLRLQDVA EVVEGAENAR LAAYVAGQGL GFRPAIVLSV QRQPGANVIG
VADSVTRLLP VLQQTMPGNV EVRVVTDRTT TIRATVHDVQ LELLLAVGLV IWVIWLFLRN
AQATIIPALA VPLSLVGSLG VMHLAGYSLN NLTLMALVIA TGFVVDDAIV VIENISRYLE
KGMRPLQAAL TGAGQIGFTI ISLTVSLVAV LIPLLFMGDV VGRLFREFAV TLAVTILISA
VISLTLTPML CAVMLRPARS ADRKGEGRFF VRLLVWYEHR LDWVLAHQGL TLAVAVGTLA
LTVLLYIVVP KGFFPVQDTG VIQGMAEAPQ DTSFKAMAGR QRELAEVILE DPAVESVVFF
VGVDGINQTM ATSRLTIELR PLADRDARAP AIARRIMDRA ASLPGMTLYL QPVQDLTIED
RVSRSQYQLT VEALDRAQLD TWARRMVEAL RQQPELELVT SDYQAPGRMA WLNINRDAAG
RLGISMADID NALYDALGQR LISTIFTQTN QYKVVLEVAP RFRQGPGDME NIYVKGGDGK
PVPLTSIATI EERPTQLSIA RQGQFPVATI AFNVAQDSSL GAAVAAVNST FEHLQVPDSL
RIQFQGATQA FMASTNNQVW LILAAIVTMY IVLGVLYESY IHPVTILSTL PSAGVGALLA
LMLAGMELGV VGIIGIILLI GIVKKNAIMM IDFALDAERN EGKEPLAAIR QACLLRLRPI
LMTTMAALLG ALPLMLGWGM GAELRRPLGV TMVGGLIVSQ VLTLFTTPVI YLWFDRLSRR
VRGRGAAAAG SGGAASDAED TLDGGNGLHE AVEPVNVWGD ASGGDGAADV PARGSAMPGG
SRT