Gene Ddes_0731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0731 
Symbol 
ID7284405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp856208 
End bp857899 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content61% 
IMG OID643581527 
Producthistidine kinase 
Protein accessionYP_002479317 
Protein GI220904005 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.842876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCCG TTCCGCGTCC GGGGGCCTGC CGTCCGGTTT TTGCGCGCCG TATGCTTATG 
GCTTTTGTGT TTCTGGCCCT CGGCATGGGG GCTGCCCTTG GCCTTGCTGC GCATCTGTCT 
TTTGAATATC TGGGCAGCTA TCTTGTGGGC TGGCATGCAA GGCCGGTGAT GGAAACCCTT 
ATCGAGGCCG AAAAGCGCGC CTGGGAAGCG GAAGACAGTG GCCGGGACCG GCTGTATTAC 
GGTGAAGATC TGGCAACGGC CATGCACTGG ACGTTTCTTG TGGGCAAGCA GGTTTCGCCG 
CAATGGCGGG AACTGCCCGA TGGCCTGCAC TTTATGGATG ACGGCAAGGA ATTTGTTCTG 
ATCGAGCGTC GTGATGGGGT GGAGTACGCG CTCAAGGGCG GCACGGGAGC TTTTCAGGCG 
CTGAAAAGCC GGTTTAACGG CATCCTGCTG TTCTGCGCTC TGACCGGGCT TGCTGTGGCT 
GTCGCTCTGG CCGTTATTTT GAGCCGCCGC CTCACCGGAC CGCTGCGCCG TCTCACCCTC 
GCGGTGGAAA GCCGCCTGCC GGGCGGCCTG TCTTTTTCCG CAACAGGCGC GGCCGAAAAT 
ATGGCGACCG CCATGCCCGG GGGACCTGAC GCCGCCCGGC AGAGTCTGAC GCAAACTCCG 
TGTCCGCCGG ATTCCGTCCT GCTCGCAGAC CCGGGCCAGA TCATGCGTCC GCACATGTCG 
CCCGGGCCTG TACCCATGAC GGATATGGAC GACGAGGTGG GTGTTCTCGC CCGCGCCATT 
GCCGCCCGTG AGGAGGCGCT CTACCGTTTC GTGCAGCGCG AAAGCCATTT TACCGGCGAC 
GTAAGCCACG AACTGCGCAC ACCGCTGACG GTCATGCAGG GCGGGCTTGA AGTTCTTGAG 
GCACGTCTGC AGAATCTGGT CAGAGCGACC CCTCAGGCCG GAGAGCTTGT TCCTGTTGTG 
GGGCGTCTTT TGCGTACCAC ATCCGACATG ACCCGCACCG TACGCACGCT TCTTTTGCTG 
GCCCGGAAAC CCGGAGAAAT ACAGGCTGCT GCGCTGGACT GTTCGCTGAT TTTGCGGGAT 
ATCATAAACG AAATGGAGCG CGAAGGTGTT GTATGTCCGG TGGAGTTTCC GCAGACGCCT 
TCACACGCTC AGGCAGACAG TCTGGCCGCC ATGCTGGCAC TGCTCGAGGG CGGCGATCGC 
CTGCCCGAAT TGACTCCGGT GGCGGCTTCG TCAGTGGTCT GGTCCAGGCT ACAGGAAGCA 
GCCCCGGCTG ATCCGCGTTC CTCTGGCGCT GCCGGGGTGT TTCTGGCCGT GGGCCTGTCC 
TCGCCTGTTC CGGTATGCGG ACAAAAAGAG CTGATAACCG TCATATTCAA GAATTTGCTG 
GACAATGCCC GCCAGTACAC CGAAAATAGG CGCGCTTTTG TATTGCTTGA GTCCGGCAGG 
ATGCTGGTCG GCAATAAGGG CCACATTGTT CGTGATGTGG ATATTTTTTC GCGCGGCGTC 
AGCCGCTCCT GTAACAACGG TCAGCAATCC GCCCGGGAAG GGGCGGGCAA CGGGCTGGGG 
CTTTCCCTTG CCCAGCGGGC CTGCGAGCGT ATGGGCTGGC GGCTCGAGCT TGCGTCACTT 
CCCGCAGGCG TGGATGGAGT GACCGTTTTC AGCCTTATTT TCCCCCCGGC AGCCCAAGGA 
GAAGACGTAT AA
 
Protein sequence
MPAVPRPGAC RPVFARRMLM AFVFLALGMG AALGLAAHLS FEYLGSYLVG WHARPVMETL 
IEAEKRAWEA EDSGRDRLYY GEDLATAMHW TFLVGKQVSP QWRELPDGLH FMDDGKEFVL 
IERRDGVEYA LKGGTGAFQA LKSRFNGILL FCALTGLAVA VALAVILSRR LTGPLRRLTL 
AVESRLPGGL SFSATGAAEN MATAMPGGPD AARQSLTQTP CPPDSVLLAD PGQIMRPHMS 
PGPVPMTDMD DEVGVLARAI AAREEALYRF VQRESHFTGD VSHELRTPLT VMQGGLEVLE 
ARLQNLVRAT PQAGELVPVV GRLLRTTSDM TRTVRTLLLL ARKPGEIQAA ALDCSLILRD 
IINEMEREGV VCPVEFPQTP SHAQADSLAA MLALLEGGDR LPELTPVAAS SVVWSRLQEA 
APADPRSSGA AGVFLAVGLS SPVPVCGQKE LITVIFKNLL DNARQYTENR RAFVLLESGR 
MLVGNKGHIV RDVDIFSRGV SRSCNNGQQS AREGAGNGLG LSLAQRACER MGWRLELASL 
PAGVDGVTVF SLIFPPAAQG EDV