Gene Ddes_0723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0723 
Symbol 
ID7284397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp850024 
End bp850707 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content61% 
IMG OID643581519 
Productprotein of unknown function DUF847 
Protein accessionYP_002479309 
Protein GI220903997 
COG category[R] General function prediction only 
COG ID[COG3926] Putative secretion activating protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.711054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAATT TTTTTCAGAA AGCTCACGAA TTTACCGCCC GCTGGGAAGG AGGCCTTACC 
GACTATCCCT CTGACCCCGG TGGTCTGACC AATCACGGCG TTTCCCTGCG CTGGGTGCAG
GACCTGGCCC GTCAGGCCCG TGAAGACTGC CAGCGGCAAG CCCGCAGCTG TGACGGCTGC
AATGCGATGC GAACCAGCAA ATGCGGCTAT TACAGCCTGG ATATGGATAT GGATGGCGAT
GTGGACGCCG ATGACATCCG CGCCTGCACC AAGGCCCAGG CTGCGGCCCT GTTTAAAAAA
CACTTCTGGA ACAAGCTCGC CTGCAATGGC TTGCCCCTGC CCCTGGCTGT GACGCTTTAT
GACGGTGCGG TGAATATGGG TCCCGCGCGG GCCGTGCGCC AGATGCAGCG GGCCATGAAC
ACCGTGGGAG AATCCGAACT GGACCGCTAC GCACCCATTG CCGAAGACGG CATCATGGGG
CCCCGCACCG CGCAACTGGC CGAGGCGCTG GAGCAGAGCG GGCAGCAGTG GTACGCGGCA
CGCCAGATAC TGCGCCTGCG CGACGCCTTT TACCGTGACC TGGCGGCCAG ACGTCCTTCC
ATGCAGGTTT TTCTGAATGG CTGGCGCAAC CGGGTCAAGG CGCTTGGTCA GTACCTGGGC
GAGCTTGAAA GGGAGGAAAA CTGA
 
Protein sequence
MSNFFQKAHE FTARWEGGLT DYPSDPGGLT NHGVSLRWVQ DLARQAREDC QRQARSCDGC 
NAMRTSKCGY YSLDMDMDGD VDADDIRACT KAQAAALFKK HFWNKLACNG LPLPLAVTLY
DGAVNMGPAR AVRQMQRAMN TVGESELDRY APIAEDGIMG PRTAQLAEAL EQSGQQWYAA
RQILRLRDAF YRDLAARRPS MQVFLNGWRN RVKALGQYLG ELEREEN