| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0696 |
|---|
| Symbol | truA |
|---|
| ID | 7284370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 826866 |
|---|
| End bp | 827645 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643581492 |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_002479282 |
|---|
| Protein GI | 220903970 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.214001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGA AACTTCTTAT TTCCTACGTG GGCACTGGCT ACAGCGGCTG GCAGATTCAG
GAAAAACCCA AACCGCCGCC TACGGTGCAG GGCGCTCTTG AAGCCGCACT GCGTACCATT
GCCGGTAAAG CCGTGCGCGT TCACGGTTCG GGCCGCACTG ATTCCGGTGT ACATGCCCAC
GGCCAGGTGG CCCATTGCGA CATCCCCGAT ACCCGGGCCG GGCTTGACTG GCGGCACAGC
CTCAATGCCG TGCTGCCGCG CGATATCCGC GTACTGGACG CCTCCCCCGC TGCCCCGGAC
TTTCATGCCC GCAAAGACGC CCTGCGCAAA ACCTATGCCT ACCAGTTCTG GCAGGACCGC
CGCTTTCTGC CGCCGCACGT GCGCCCGTAT GTATGGAACT GCGGCATGCT GGACCTGGAC
GCCATGCGCG ATGCCCTGCC CTTTCTTCTG GGCAGGCACG ACTTCGCCGG CCTGCGTAAT
GCCGGTACGG ATGTGGAGAG TACCGAACGT ACCATTATGG ACGCCCGCCT GGACGCACTG
GCCCCCTGCG AATACTACCC CCCCCATGCC CCCATGCTGC GCCTTACCAT TACGGCCGAT
GGCTTTCTGA AACAGATGGT ACGCAATGTG GCCGGTCTGC TTGCCGCGTG CGGTCAAGGC
AAAATACAGC CCGCGCAGAT ACCTGCGCTG CTTGCAGCCC GCGACCGCCA GGCAGTGCCT
TCGGTAACGG CCCCACCCGA GGGGCTGGCG CTGGTGAGTG TGAAATATCC AGAGCCATAG
|
|---|
| Protein sequence | MRLKLLISYV GTGYSGWQIQ EKPKPPPTVQ GALEAALRTI AGKAVRVHGS GRTDSGVHAH
GQVAHCDIPD TRAGLDWRHS LNAVLPRDIR VLDASPAAPD FHARKDALRK TYAYQFWQDR
RFLPPHVRPY VWNCGMLDLD AMRDALPFLL GRHDFAGLRN AGTDVESTER TIMDARLDAL
APCEYYPPHA PMLRLTITAD GFLKQMVRNV AGLLAACGQG KIQPAQIPAL LAARDRQAVP
SVTAPPEGLA LVSVKYPEP
|
|---|
| |