| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0685 |
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| Symbol | rpsD |
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| ID | 7284358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 813567 |
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| End bp | 814193 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643581480 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_002479271 |
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| Protein GI | 220903959 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAAT ATACTGAAGC CAAGTGCCGC ATGTGTCGTC GCGAGGGCTG CAAGCTCTTT
TTGAAGGGCG ACCGTTGCTT TACCGACAAA TGCGCCTATG ATCGCCGCCC CTATGCCCCC
GGCCAGCATG GCCGCGCCCG CAAAAAGGTG AGCGAATACG CGGTGCAGTT GAGGGAGAAG
CAGAAGACCC GCCGTATTTA CGGCATTCTG GAGCGCCAGT TCCACGGCTA CTTTGTTAAA
GCCGACATGC AGAAGGGCGT TACCGGTACC AACCTGCTCG TCATTCTTGA ACGCCGCCTG
GACAACGTGG TTTACCGCCT TGGTTTCGCC AACTCGCGCA ATCAGGCCCG CCAGCTCGTG
CGTCACGGTG TTTTCACCCT CAACGGCCGC AAGGTGAACA TTCCTTCCTT GCAGGTGCGT
CTGGGCGATA CCATCGAAGT GCCTGAAAAG AATCGTAAGA TTCCCGTGCT CGCTGAAGCT
CAGGAAGTTA TCGCCCGCCG CGGCTGCCCC GCCTGGCTGG AAGCCGACGG CGCCGCTTTC
AAGGGTACTG TCAAGGCAAT GCCGCAGCGT GACGACATCC AGTTCCCCGT CAACGAGCAG
CTTATCGTCG AACTTTACTC GAAATAA
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| Protein sequence | MAKYTEAKCR MCRREGCKLF LKGDRCFTDK CAYDRRPYAP GQHGRARKKV SEYAVQLREK
QKTRRIYGIL ERQFHGYFVK ADMQKGVTGT NLLVILERRL DNVVYRLGFA NSRNQARQLV
RHGVFTLNGR KVNIPSLQVR LGDTIEVPEK NRKIPVLAEA QEVIARRGCP AWLEADGAAF
KGTVKAMPQR DDIQFPVNEQ LIVELYSK
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