| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0642 |
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| Symbol | |
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| ID | 7284314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 779566 |
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| End bp | 780945 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643581437 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_002479229 |
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| Protein GI | 220903917 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.135903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG AAACACCAGA GCTTCACCGT GCCTTGAAGA ACAGGCACAT CCAGTTGATC
GCCCTTGGCG GGGCCATTGG CACGGGCCTT TTTCTCGGAT CTGCGGGAAC CATCCAGATG
GCCGGGCCGG CTGTCATACT GAGTTACGCC ATTGGTGGTT TTATCGCCTT TCTCATTATG
CGCCAGCTTG GCGAGATGAT GGCGCAAGAG CCTGTGGCCG GCTCTTTCAG CAATCTTGCC
TACAAATACT GGGGCGAGTT TCCTGGTCTT CTTTCCGGCT GGAACTACTG GATTCTTTAT
GTTCTGGTGG GCATGTCCGA ACTGACGGCC GTGGCTGTTT ATGTGCAGTA CTGGTTTCCC
GGCATTGAGC CGTGGCAGAC CACGGCTTTT TTCTTTATTC TCATCAATGT GGTCAACCTG
GCGCAGGTTG GCGTTTTTGG CGAAATGGAG TTCTGGTTTG CTTCCATCAA GGTGGCGGCC
ATTGTGGCCA TGATCGCCCT GGGGACGTTT CTGCTTGCCA CCGGGGGGGC CGGACCCGAT
GCCAAAGTAA GCAATCTTTG GGAGTATGGC GGCTTTTTTG CCAGGGGTTG GGGGGGCGTG
TTTACCTCGC TTGCGGTGGT GAGCTTTTCT TTCGGCGGGC TTGAGCTTGT GGGCATAGCT
GCGGCGGAAA CTTCTGATCC GCAAAAAACC ATTCCCAAGG CCGTCAACCA GCTCATCTAC
CGAATCCTGA TCTTCTACAT CGGCGCGCTT ACCGTGCTTC TGGCGTTGCA CCCCTGGAAC
CAGCTTGGCG CTTCCGTTGA CAAAAGCCAG TGGGCCGAGG CCATGGTCGC CAGCCCCTTT
GTGCAGATTT TTGACCTCAT AGGTATTCCT TCTGCTGCGC ACGTGCTCAA CTTTGTGGTG
CTGACTGCGG CCCTTTCCGT ATATAACAGC TGTGTCTACT GTAACAGCCG CATGCTTTAC
GGCCTGGCGC TTCAGGGCAA CGCGCCCAAG GTTCTGGCCG CTGTGAGCGC CAGGGGGGTT
CCGGTTTATG CGCTGATGAT TTCTTCCGGC GCAACCCTGC TGTGCGTATT GCTGAACTTC
ATTATGCCCG CCAAGGCCCT TGGCGTGCTT ATGGCCCTGG TGGTGACGGC TCTTGTGATC
AACTGGGCCA TGATAAGCCT GACCCACCTG AGATTCAGGG CCGCCAAGAT AAAGGCCGGA
GAAAAGATAG TTTTCAGGGC ATTCTGGCAT CCCTGGTCCA ACTACCTCTG TCTTGTCTTT
ATGATGGTAG TGTTTGTAGT GCTGGTGCAG ATAGACATGG CCGTTTCTGT TTATGTGGCT
CCCATCTGGC TGTTCTTCGT GTGGCTGGGC TACAAGATGA AGAAGCACTA TACGCAGTAG
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| Protein sequence | MKKETPELHR ALKNRHIQLI ALGGAIGTGL FLGSAGTIQM AGPAVILSYA IGGFIAFLIM
RQLGEMMAQE PVAGSFSNLA YKYWGEFPGL LSGWNYWILY VLVGMSELTA VAVYVQYWFP
GIEPWQTTAF FFILINVVNL AQVGVFGEME FWFASIKVAA IVAMIALGTF LLATGGAGPD
AKVSNLWEYG GFFARGWGGV FTSLAVVSFS FGGLELVGIA AAETSDPQKT IPKAVNQLIY
RILIFYIGAL TVLLALHPWN QLGASVDKSQ WAEAMVASPF VQIFDLIGIP SAAHVLNFVV
LTAALSVYNS CVYCNSRMLY GLALQGNAPK VLAAVSARGV PVYALMISSG ATLLCVLLNF
IMPAKALGVL MALVVTALVI NWAMISLTHL RFRAAKIKAG EKIVFRAFWH PWSNYLCLVF
MMVVFVVLVQ IDMAVSVYVA PIWLFFVWLG YKMKKHYTQ
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