Gene Ddes_0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0641 
Symbol 
ID7284313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp778155 
End bp779267 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content61% 
IMG OID643581436 
ProductAlanine--glyoxylate transaminase 
Protein accessionYP_002479228 
Protein GI220903916 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.322561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAG TTTTGGGATC GCTTGACCAT GTTCTGCTGA TGGCCCCCGG CCCCAGCCCC 
GTTGCCACCA ACGTTCTCCA GGCCATGAGC CTGCCCACCC TGGGGCATCT TGACCCCGAC
TGCATCAAGG TTATGGATGC CATCCAGGAC CAGCTGCGGG CCGTGTGCAA AACCGGCAAC
GTGGTAACCT TTCCCCTGTC GGGCACCGGC TCTGCGGGTA TGGAAGCATG CTTTGTGAAC
CTGGTGGAAC CGGGCGATGC CGTGCTTGTC GTCAACAACG GCGTATTCAG TTCGCGCATG
GTAGAGGTGG CTTCGCGCCT GGGCGCAGAG GTGGACGTGG TTGAAAGCCC CTGGGGTACT
CCCGTAAAGG TCGAGGACGT CAAAACCCAG CTGGGCAAAA AACACTACAA GATCCTGGCC
GTGGTGCATG CCGAGACATC AACGGGCGTC AACAACCCCA TTGCCGAGAT CGGTGAGCTG
GTCAAGGGCA GCGACACTCT TTATATGGTA GACAGCGTGG CCGGACTCGG CGGCGTGGAC
ATGCAGGTGG ACAACTGGGG CGTGGACGCT TTTTACAGTG GTTCGCAAAA GTGCCTTTCC
GTACCTCCCG GCCTTGCTCC CGCCTCTTTC TCCGAGGCCG CCATGGACGC CATGGCCAGG
CGCAAGCACA AAGTACCCAA CTGGTACCTT GATGTTTCAC TCATCCGCAA ATACTGGGAA
GGCTCCCCCC GCGTATACCA CCATACCGCG CCCATCAACA TGTACTACGG CCTGCACCAG
GCGCTGGACA ACCTGCTGAC GGAAGGGCTG GACGCGGCCT TTGCACGGCA CAAGGCCATG
CATCACCGCC TGGCGGACGG CCTGGCAGAA CTGGGCTTCA GCCTGTATGT AAAGGAAGGC
GCGGCACCTC AGGTGAACCT TTTCATTCCT CCCGCCGGCG TGGACGCCAA CGCCCTGCGC
GCCTGCCTGC GCGAAAAGCA CAAGATTGAA GTGGCGGGCG GCCTTGGGGC GCTTGCCGGT
AAGGTTATCC GCGTGGGCGT TATGGGCGAA GGCGCACGGC CCGAAGCCAT TGACAAACTG
CTTGCCGCTG TCCGGGCCTG CCTCGGCCGG TAG
 
Protein sequence
MSTVLGSLDH VLLMAPGPSP VATNVLQAMS LPTLGHLDPD CIKVMDAIQD QLRAVCKTGN 
VVTFPLSGTG SAGMEACFVN LVEPGDAVLV VNNGVFSSRM VEVASRLGAE VDVVESPWGT
PVKVEDVKTQ LGKKHYKILA VVHAETSTGV NNPIAEIGEL VKGSDTLYMV DSVAGLGGVD
MQVDNWGVDA FYSGSQKCLS VPPGLAPASF SEAAMDAMAR RKHKVPNWYL DVSLIRKYWE
GSPRVYHHTA PINMYYGLHQ ALDNLLTEGL DAAFARHKAM HHRLADGLAE LGFSLYVKEG
AAPQVNLFIP PAGVDANALR ACLREKHKIE VAGGLGALAG KVIRVGVMGE GARPEAIDKL
LAAVRACLGR