| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0639 |
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| Symbol | |
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| ID | 7284311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 774019 |
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| End bp | 776901 |
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| Gene Length | 2883 bp |
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| Protein Length | 960 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643581434 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002479226 |
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| Protein GI | 220903914 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0713172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAT TTCGGTACAG AATTTTTCTT CCGGTCCTCG CCATTGCAGT TTACCTGTTA
TTGTCCACGT CCGCTCTTGC CGGAGAGGTC GTGCGCGTGG GATTTTTTGA GTTCGGCGAC
TATATGACCC GTGACCGGAA CGGGCATTAC CGGGGAACGG TCTTTGAAAT TCTGCACGAA
ATTTCGACCA ATACGGGAAT ACGCTACAAG ATCGTGGATT GCGACGACTG GCCGCGCGGT
CTTCAACTGC TCGAGCAAGG CCAGATAGAC CTGCTGCCCT GCACGTTTTT CCTTTCCGGC
CGGGAAAACA GCATGCTCTT TCCCGACCTG CCCCTTGCCA TTTCCTTTGT CTCCATCGCC
GTCAAACCGG ACGATGCCCG TTACAGATAT GACAAACCAG CGAGTTTTGA CGGCATGCGT
GTAGGTGTTA TTTCCGGCGC CAGGGATGCT CCCGCCCTTG CAGCCTACGC CCGCAAGATG
GGTATACGCC TGTCCCCGGT TGCCTACACC ACCACCCCGG CCCTGCTGCA AGCCCTGCGC
GACAATGAGG TGGACGCCAT TGCCACCAGC CAGCCTCGTA ACGACACTCC CCTCCGCGTG
GTGGCACATT TTTCTCCGGA ACCTTTCTAT TTTGCCGTCA CCCCCAGGAA ATCACGGCTG
CTTGCCACGC TCAACGAAGA GCAGCGCCGG ATCGCGCGGC GTGTCTCTGC CACCCATGAG
CTGTACGGCA AATATCTCTC CGTCAATATG GCCGAACAGT CTCTTTTTAC TCTTGATGAA
CATCTGTACC TGAATGAGGG CAAACCCGTT ATCGTGGCGT ATGACCCGGA CTGGCCCCCG
CTGACCTGGG AAGATCCTCA GACACGGGCT TTTTCGGGGA TTGTTGCAAA CCTGTTTGAT
AAAATCCGTC AGGCAACGGG GCTCAGGTTC CAGTTTGTTC CCATGTCCAT GTCCCAGTCC
CTGAGCATGG TCACCAGCGG CGAAGTAGAT ATTGTCTGCG CTCTTTCCGG AAATTTTCTG
TGGGACAAAG AGCTGTTCAT GCGTACTACG CGTCCGTATC TGCGCACGGC GGTGGTTCAG
ATATACCGAC GTGACGGCTC GCCCCAAAAC GGGCGTCGCA TCGCGTTGCG CCGGGGCTGC
CTGATTTCAA GCCAGGTGGC CGCCGACAAC AAGGACAAGC AAGCGCACTA CTACGACAAC
CTCACAGAAT GCCTGGACGC CCTCGTCAAC GGCGAAACGG ACATGACCTA TTCTGACGTC
TACGCCGCAG CCCACCTGCT GAAAAACCCG CGTTACGCGG GCCTGTCTGT GAATCCTGCG
GACAAATACA TCAGCAATAT CAGGATGGGC GTTTCGCGCC AGGCAGATCT GCGCCTGTAT
TCCATCCTGG ACAAGGGCCT GCAATTTCTG CCGGAAAGCC CTGTCGACAG CATGGTGTCC
GCTGCGGGTC CGTTGCAGCG TGAAACCACG CTTGCAGAAT TCATCAGCCA GAATCCTGTA
AGTACATTCA GCGCTCTCAT GCTCTTCTTC CTCACTGTCA CCCTGCTCAT GGGCATCAGC
CTCGCCATCA AGTCCAACAG CAACAAGCGC ATACAGGTAC TGCTGCACCG CGACATGCTC
ACCGGCCTGC CCAATCTTTA TAAATTCCGC CAGGACTGCG CCAAACTGCT CGCAGATACG
GGCAAGCATG CCTATGTGCT GCTTTTTGGC GATATCTGCC AGTTCAAGGC CATTAATGAC
CAGTTTGGTT TTTCCAGCGG CGACAGGCTG TTACGCGCAT ATGGCGATAT ATTGAGAAGT
AATGTGGGCG AAGGTGAACT TTGCGCCCGC GCATCGGCCG ACATGTACTC GATGTTTCTG
CGCTATGAAG GGTGGGAGCT GTTGCTGGCG CGGCTGCGCC ATATGGATGA CAGTCTGGAT
ATCTGGCGGC AAAAAGAAGA AATGCCGTAT AAGGTCAAAA CGGTATATGG CGCCTACATT
GTCAGTGGCA CAGAAGGGCG CGATGTGCAG CTCATGCTTG ATCTGGCAAA CTATGCGCGC
CGCGAGGCCA AACGCAACGG CAGCACCAGC CTGATGCTCT ACGACGAGCA GATGCGACAG
GAAACCCTGT TACACCAAGA ACTTAACGGC AGACTTGAGA CCGCCCTCAG GGAGGGCGAA
CTGGTCCCGT GGTATCAGAT CAAGGTGGAC ATGCGCACAG GCGCCATTAT CGGCAGCGAG
GCCCTGGTGC GATGGAAGCA CCCCACCCGC GGCCTGCTTA TGCCCGACAG TTTTATTCCC
CTGTTCGAGC GCAACGGCCT GATTATGGAC ATTGACATGC ATGTCTTCAC GCAGGTCTGC
AAGGCCATGC AGAGCTGGCG TTTGCGCAAT CTGCCCTTGT ACACTGTTTC ATGCAATTTC
TCGCGCGTAC ATTTTGACCG GCCCGGATTC CCCCGGCAAC TGGCAGAAAT AGCCGACCGC
TACGCCATTC CCCACGAGTT GCTGGAAGTG GAAATTACTG AAAGCGCCAT CATGAAAAAC
CCCGAGGCGG CCTGGCTGCG CCTGATCCAG CTCAAACAGT ACGGCTTCAA GACCGCCATT
GACGACTTTG GCGCGGGCTA TTCCTCACTG GGCCTCGTGC AGATGCTCAA TGCCGACGTC
ATCAAGATCG ACCGCAGCTT TGTCCTGCGC GACCTGCCCG GCCAGAGGGC GCAGACAGTG
CTTGGCAATA TCATACGCAT GGCTCTGGAT CTTGAAATGT CTGTTATCTG CGAAGGTGTG
GAAACCGCCG AGCAGGCGGC CATTCTTATG CGGCTTGGCT GCTTCAAGGC TCAGGGCTAC
TACTATGCCA AACCCGAGCC GGAGCACGAA TTTGAAGCCC GGCTGGCCAT GCTCATCACA
TAG
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| Protein sequence | MKIFRYRIFL PVLAIAVYLL LSTSALAGEV VRVGFFEFGD YMTRDRNGHY RGTVFEILHE
ISTNTGIRYK IVDCDDWPRG LQLLEQGQID LLPCTFFLSG RENSMLFPDL PLAISFVSIA
VKPDDARYRY DKPASFDGMR VGVISGARDA PALAAYARKM GIRLSPVAYT TTPALLQALR
DNEVDAIATS QPRNDTPLRV VAHFSPEPFY FAVTPRKSRL LATLNEEQRR IARRVSATHE
LYGKYLSVNM AEQSLFTLDE HLYLNEGKPV IVAYDPDWPP LTWEDPQTRA FSGIVANLFD
KIRQATGLRF QFVPMSMSQS LSMVTSGEVD IVCALSGNFL WDKELFMRTT RPYLRTAVVQ
IYRRDGSPQN GRRIALRRGC LISSQVAADN KDKQAHYYDN LTECLDALVN GETDMTYSDV
YAAAHLLKNP RYAGLSVNPA DKYISNIRMG VSRQADLRLY SILDKGLQFL PESPVDSMVS
AAGPLQRETT LAEFISQNPV STFSALMLFF LTVTLLMGIS LAIKSNSNKR IQVLLHRDML
TGLPNLYKFR QDCAKLLADT GKHAYVLLFG DICQFKAIND QFGFSSGDRL LRAYGDILRS
NVGEGELCAR ASADMYSMFL RYEGWELLLA RLRHMDDSLD IWRQKEEMPY KVKTVYGAYI
VSGTEGRDVQ LMLDLANYAR REAKRNGSTS LMLYDEQMRQ ETLLHQELNG RLETALREGE
LVPWYQIKVD MRTGAIIGSE ALVRWKHPTR GLLMPDSFIP LFERNGLIMD IDMHVFTQVC
KAMQSWRLRN LPLYTVSCNF SRVHFDRPGF PRQLAEIADR YAIPHELLEV EITESAIMKN
PEAAWLRLIQ LKQYGFKTAI DDFGAGYSSL GLVQMLNADV IKIDRSFVLR DLPGQRAQTV
LGNIIRMALD LEMSVICEGV ETAEQAAILM RLGCFKAQGY YYAKPEPEHE FEARLAMLIT
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