| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0636 |
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| Symbol | |
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| ID | 7284308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 768271 |
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| End bp | 770295 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643581431 |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_002479223 |
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| Protein GI | 220903911 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTGA CACCACAAGA TAAAGATAAA GAAAAAGGCC CCATTGCTCC GGCGGCAAGC
CCTGCGGAAT CCGCTGTGCC CGACGGTGCC CGGGGGCAGG AGTCCGGCGG TCCGGCCGCT
TCCGGGGCCG TTTCTCCGGA TTCTTCTTCC CGTACCGCGC CGCAGCCGGA TTTTAATGCG
GCTTTTTGCG GCACGGCCGA GAACGGGTTT TTGTGTTACC TGCCCTCGGG GCAGGCTCCC
TTTGGCGCGC CAAAGCCGGT CCATAAAGAT GATGCCCTGC CCGCCATGCC CGGTGCGGGA
TCGGAAGGAG CCGCGCCCAT CGTCATGCCT GTGTCTGGCG AGCATGATGG TCACTGGACG
GATGATCAGG TGGACGGCAT CGGCTTTCTC CCGCTGGGGC ATGGTGAGGA GAGCCGTCAT
GACATGCCGC ACCCCGTCGG CCCGGAAGGG AGCGTTCCCG CGCCTGTCGA GCAGAGCGGC
CCCAAGGCTT TTCTGCGCGA CCTGCTCATG GGCGGCGAGC ATGAGCAGCG GCCGGATAAA
AGTCTCCGCC AGTCCATCGC CGAAACCCTG AACCGCCTGA AAGGCGGTGA GGGAGCGCCG
CCACCCGGCC AGCAGCAGGG CAATCCCGGT CTTTTTGCTG CTATGGACGC ACCCCTCAAC
GGCCTGACAC CCGACGACAT ACAGTTTGCC AGCGAGGTGG ACGCCGCGCT GGCGCGCAGG
CCCCATTTCG GTGTCCGGGC GCTCTCCATC TGCGTGGCGG TCATGTTTTT GTGTCTCATC
ATCTGGGCTG CCTTTGCCAG TGTGGACGAA GTGACCCACG CCGAAGGCAC GGTGGTGGGG
TCACAGCGTA CCCAAACCAT ACAGAACCTT GAAGGCGGCA TTCTGCGTGC CGTTATGGTG
CGCGAAGGCC AGATTGTGGA CAAGGGGACA ATACTGGCCC AGCTGGATAA CGAAATGGCC
GAGAGCGCGT ACCGCGATGC CGTGAACAAG GCTATGGAAA ACAGTCTGGC AATAGCCCGC
CTTGAGGCGG AAATAAAAAG TGAGCCACCT GTTTTTCCGG AGCATCTTGA AGCATGGGCC
AGTCAGCTTA TTGGCCGCAG GGTGGACGAA TCCGTCCTGG CCCGCGCCCG CCAGATCATG
CAGGACCAGG AAAATGCCTA TCAGGTGCGT CGTGTACAAC TGAATGCTGA AGTCGAGGTA
TTGCAGTCGC AATACACCCA GCGCATGCAC GATGTCGAGG AGCAGACAGC CCGCAAGGTA
CAGCTTGACC GCAGCCTGGC CCTGGCCATT GAGCAGCGTG ATACTGCCTA TGCGCTGGTG
CAGCGCAACA ACTTTTCCAA GATGGAATAT CTCGGCCTGC AGCAGCGGGT GGTGGAACTG
CAGGGGCAGA TTGACGCCCT GGCCGCAGCC ATACCCAAGG CGCAGGCTGC GGCTGAAGAA
TCGCGGCAGC GCATAGCTTC GCGCCGTGCG GAGCAGGCCT CGGCCATTAC GGAAGAAATC
AATAAAAGAC GCCAGGAGCT GAACTCGCTG CGCGAAAGCA TCTCTGCCGG ACGCGACCGG
GTGACCCGCA CCGAACTTCG CGCGCCTGTG CGCGGCACGG TAAAGCAGAT ATACATTTCT
ACCGTGGGCG GCGTGGTAAA GCCCGGTGAA CCCATCATGG ACATCGTGCC CCTGGACGAT
ACCCTGCTGG TGGAGGCCAA GGTCAAGCCG CAGGACGTGG CTTTTCTGCG TCCCGGGCAG
GATGTGATGG TCAAGGTTTC TGCCTATGAC TTTTCCATTT ACGGCGGTCT TGAGGGCAAG
CTTGAGTCCA TCAGTGCCGA CACCATTGAG GACAAGAAGG GCGAGCATTT TTATCTGGTC
AAGGTGCGTA CCCAGAAAAA TGCCATTGTC TATCACAAGG AATATCTGCC CATTATCCCC
GGCATGATTG TGACCACAGA TATTCTCATC GGCAAAAAAA CTGTTCTGGA TTATCTGCTC
AAGCCCATTC TCAAGGCCAA GCAGAACGCC CTGCGAGAGC GCTGA
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| Protein sequence | MQLTPQDKDK EKGPIAPAAS PAESAVPDGA RGQESGGPAA SGAVSPDSSS RTAPQPDFNA
AFCGTAENGF LCYLPSGQAP FGAPKPVHKD DALPAMPGAG SEGAAPIVMP VSGEHDGHWT
DDQVDGIGFL PLGHGEESRH DMPHPVGPEG SVPAPVEQSG PKAFLRDLLM GGEHEQRPDK
SLRQSIAETL NRLKGGEGAP PPGQQQGNPG LFAAMDAPLN GLTPDDIQFA SEVDAALARR
PHFGVRALSI CVAVMFLCLI IWAAFASVDE VTHAEGTVVG SQRTQTIQNL EGGILRAVMV
REGQIVDKGT ILAQLDNEMA ESAYRDAVNK AMENSLAIAR LEAEIKSEPP VFPEHLEAWA
SQLIGRRVDE SVLARARQIM QDQENAYQVR RVQLNAEVEV LQSQYTQRMH DVEEQTARKV
QLDRSLALAI EQRDTAYALV QRNNFSKMEY LGLQQRVVEL QGQIDALAAA IPKAQAAAEE
SRQRIASRRA EQASAITEEI NKRRQELNSL RESISAGRDR VTRTELRAPV RGTVKQIYIS
TVGGVVKPGE PIMDIVPLDD TLLVEAKVKP QDVAFLRPGQ DVMVKVSAYD FSIYGGLEGK
LESISADTIE DKKGEHFYLV KVRTQKNAIV YHKEYLPIIP GMIVTTDILI GKKTVLDYLL
KPILKAKQNA LRER
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