Gene Ddes_0635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0635 
Symbol 
ID7284307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp765507 
End bp768269 
Gene Length2763 bp 
Protein Length920 aa 
Translation table11 
GC content60% 
IMG OID643581430 
Producttype I secretion system ATPase 
Protein accessionYP_002479222 
Protein GI220903910 
COG category[V] Defense mechanisms 
COG ID[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain 
TIGRFAM ID[TIGR03375] type I secretion system ATPase, LssB family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.144577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGC CTGACACCAC ACAGATTTCA GGGAAGACCC CGGACGGAAC GGCAGCCAGC 
GCGACTGCGA ACGGTGCTGC TCCCACGCCG GCCTCCGCAA CGTCTTCTGC TGCAGGCACG
CATGCTGCCT CCATAGGCCC GGCCTCGCCC GGGTCCGGGA GCGCGACGCA GAATGCCGGA
CTTTCGCAAC TTTCCGGAGC CGTGACCATA TTGCCCGGCC AGCAGGCAAA AGAGGCTGCC
CCTGCGTCTG GGCAGGAGGG CATGCCGCCC GGCATGCCCA ATGGCAGCGC TGTGCTCGGC
AATGCCCACC CCCGCACGGA AGCTTTCAGT GAACGGGATG CCGCTGCTGC CGCTTCCGCT
GAGGTTGCCG CACCTGCGCA GGACGCAGGA ACCGCCGGAA CGCAGCCGCA GTCCGCAGCC
GAAGCCGGAG CAGTCCCGGA TGCTGAAGGT GCTCCCGCGC CGGGCGACGC ACAGGGAGTT
TCAGGCCAGA CGGGTGAAGC CGCCATGAAC GCCATGGCCC AGGCCGCACG TCACGAAGCG
GCCATGAAGT CCGGCCAGTC GGGCAGAGAT TCCGGCATGG GGCCTTTGCG CCCGTCTGAC
GTTGACTTCA TGCCCGGCCT GTTGCGCAGC CTTGCAGTGC TGTTGCGCTT GCGCGGCAGG
GTGGTCAGCC CGCAGTTTCT TATGGCCGGT CTTACCGGCA GCAAGGTAAC CCCCCAGGCG
TGCCTCAGGG CTGCGCGCAA GGCCGGGCTT TCGGGCCGGA TTGTTTTTCG CCCGGAGCTG
GAGGATATTC CCACCCTGGT AATGCCCTGC ATTCTTCTGC TGACCCGCGA TCGCTCATGT
GTGCTGACAG GCATGAAAGA CGGCATGGCC GAGGTCATAT TTCCTGAAAC CAGCGATGCC
GCGCAGGCGG TGTCTCTTGA AGATCTCAAG CAGGAATACT CCGGTTACGC ACTCTTTGCC
GCTGTGGAAT CCGCACCCGA TGACCGCGCC GAGCGGCTGA GCATTTCGCA CGGCAAGCGC
TGGTTCTGGG ATGTGCTGCG TTATTACGCG CCCATTTACC GGCATGTGGC TCTGGCCAGT
GTGGTGATCA ACCTCATTGC CGTGGGCAGC CCGCTTTTTG TCATGAACGT CTACGACCGC
GTGGTTCCCA ATAATGCCAT TGAAACCCTG TGGGTTCTGG CTATCGGCAT TCTCATAATC
TATCTCTTCA ACTTTTTGCT CTCGTCGTTG CGTACCCATT TTGTGGACGT GGCCGGGCGC
AATGCCGACA TTGTGCTTTC GAGTTCGCTG GTAGAGAAAG TGCTTTCAAT GCGCATGGAC
GCCAAGCCAG AATCCACAGG GGCACTTGTT AATAACCTGC GTGAATTCGA GCAGTTACGC
GAATTTTTCA GCTCTTCAAG CCTGCTGGCC TGCATTGATC TGCCTTTTCT GGTCATATTC
CTGCTGCTTA TCGGATTTAT CGGCGGCCCG CTGGTATTCT TGCCTCTGGC GGCAATGCCC
CTGATGCTGG GCATCGGCCT GCTGCTGCAG TCGCGCTCGC GGCGCAGTGC CGAGGCCAGT
TACAAGCAGA ATATGCAGAA AAACGCCCTG CTGGTGGAGA TTGTGGGCGG GCTTGAAACC
CTCAAGTCGT GCATGGCCGA AAGCCGCATG CAAAAGCTCT GGGAATCTGT GGTGGGGCTT
TCCGCCCAGT CCAACAGCGA GGCCCGCAAG TACAACAATC TGGCCGTCAC GTCTTCCATG
CTCATTACCC AGCTTGTGAC GGTGGCCATG ATCGTTTGGG GCGTGTACCG CATATCCGAC
GGCCTGATGA CCATGGGCGC CCTTATAGGC TGCAATATTC TGGTGGGGCG GACCATGGCC
CCTCTGCTGC AGATGGCCTC GCTGCTTACG CGCCTTCAGA ACTCGCATGT GACGCTCAAG
GCGCTCGACA TGCTCATGGT GCTGCCTTCA GAAAACCAGG TGGAAAAAAC CTGCATGGAT
TTCGGCATGC TGCGGCCGTC ATTCACTATG GAAAACGTGT CCTTCGCTTA CCCGCAGCAG
GAGCGTCTGG CCCTTGACCG CGTATCGCTG CATATCGAGC CGGGCGAGCG TGTGGGCATC
ATCGGGCCTA TGGGGTCGGG CAAGAGCACA CTGTCCAAGC TGCTTATCGG CCTTTATCAG
CCCAAGGAAG GCGCCGTGAA ATTCGGCGAT GTGGACATAC GGCAGATACC CAGCACCGAC
CTCAGGGGAC GCGTGGGCGT ACTGCCGCAG GACGTGGTGC TGTTTTACGG CAGCATTCGC
GACAATATTG CTCTGGGCGA TCCCACCATC AATGACCATC TTATCCTGCG CGCAGCGGCT
CTGGCGGGTG TGACAGACTT TTTGCGCAAC AATCCCGCTG GTTTTGCCGC GCAGGTGGGT
GAACAGGGCA GGGCTCTTTC CGGCGGGCAG CGTCAGGCTG TGGCGCTGGC GCGCGCCCTT
GTGCGCGACC CCGAAGTGCT GCTTCTGGAT GAGCCTACCA GCAACATGGA TACGGACTCT
GAGGTAATGC TGCAAAAGCG CCTGTATTCG GTCATGGATG GGCGCACCGT GGTGCTGGTG
ACACACCGCT TGTCCATGCT GCGTATTGTA AATCGCCTGA TTGTTATGGA AAACGGCCAA
ATAAGAATGG ATGGCCCGCG CGACGCCGTT TTGCAGCGTC TGCGTGACCG TTCACGGCAA
AGCATGGATA CGGCACGACA GGGACAGGGC GCTCCGGCGC AACGGCCCGC GGAGAATATG
TAG
 
Protein sequence
MEQPDTTQIS GKTPDGTAAS ATANGAAPTP ASATSSAAGT HAASIGPASP GSGSATQNAG 
LSQLSGAVTI LPGQQAKEAA PASGQEGMPP GMPNGSAVLG NAHPRTEAFS ERDAAAAASA
EVAAPAQDAG TAGTQPQSAA EAGAVPDAEG APAPGDAQGV SGQTGEAAMN AMAQAARHEA
AMKSGQSGRD SGMGPLRPSD VDFMPGLLRS LAVLLRLRGR VVSPQFLMAG LTGSKVTPQA
CLRAARKAGL SGRIVFRPEL EDIPTLVMPC ILLLTRDRSC VLTGMKDGMA EVIFPETSDA
AQAVSLEDLK QEYSGYALFA AVESAPDDRA ERLSISHGKR WFWDVLRYYA PIYRHVALAS
VVINLIAVGS PLFVMNVYDR VVPNNAIETL WVLAIGILII YLFNFLLSSL RTHFVDVAGR
NADIVLSSSL VEKVLSMRMD AKPESTGALV NNLREFEQLR EFFSSSSLLA CIDLPFLVIF
LLLIGFIGGP LVFLPLAAMP LMLGIGLLLQ SRSRRSAEAS YKQNMQKNAL LVEIVGGLET
LKSCMAESRM QKLWESVVGL SAQSNSEARK YNNLAVTSSM LITQLVTVAM IVWGVYRISD
GLMTMGALIG CNILVGRTMA PLLQMASLLT RLQNSHVTLK ALDMLMVLPS ENQVEKTCMD
FGMLRPSFTM ENVSFAYPQQ ERLALDRVSL HIEPGERVGI IGPMGSGKST LSKLLIGLYQ
PKEGAVKFGD VDIRQIPSTD LRGRVGVLPQ DVVLFYGSIR DNIALGDPTI NDHLILRAAA
LAGVTDFLRN NPAGFAAQVG EQGRALSGGQ RQAVALARAL VRDPEVLLLD EPTSNMDTDS
EVMLQKRLYS VMDGRTVVLV THRLSMLRIV NRLIVMENGQ IRMDGPRDAV LQRLRDRSRQ
SMDTARQGQG APAQRPAENM