Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0635 |
Symbol | |
ID | 7284307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 765507 |
End bp | 768269 |
Gene Length | 2763 bp |
Protein Length | 920 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643581430 |
Product | type I secretion system ATPase |
Protein accession | YP_002479222 |
Protein GI | 220903910 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.144577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACAGC CTGACACCAC ACAGATTTCA GGGAAGACCC CGGACGGAAC GGCAGCCAGC GCGACTGCGA ACGGTGCTGC TCCCACGCCG GCCTCCGCAA CGTCTTCTGC TGCAGGCACG CATGCTGCCT CCATAGGCCC GGCCTCGCCC GGGTCCGGGA GCGCGACGCA GAATGCCGGA CTTTCGCAAC TTTCCGGAGC CGTGACCATA TTGCCCGGCC AGCAGGCAAA AGAGGCTGCC CCTGCGTCTG GGCAGGAGGG CATGCCGCCC GGCATGCCCA ATGGCAGCGC TGTGCTCGGC AATGCCCACC CCCGCACGGA AGCTTTCAGT GAACGGGATG CCGCTGCTGC CGCTTCCGCT GAGGTTGCCG CACCTGCGCA GGACGCAGGA ACCGCCGGAA CGCAGCCGCA GTCCGCAGCC GAAGCCGGAG CAGTCCCGGA TGCTGAAGGT GCTCCCGCGC CGGGCGACGC ACAGGGAGTT TCAGGCCAGA CGGGTGAAGC CGCCATGAAC GCCATGGCCC AGGCCGCACG TCACGAAGCG GCCATGAAGT CCGGCCAGTC GGGCAGAGAT TCCGGCATGG GGCCTTTGCG CCCGTCTGAC GTTGACTTCA TGCCCGGCCT GTTGCGCAGC CTTGCAGTGC TGTTGCGCTT GCGCGGCAGG GTGGTCAGCC CGCAGTTTCT TATGGCCGGT CTTACCGGCA GCAAGGTAAC CCCCCAGGCG TGCCTCAGGG CTGCGCGCAA GGCCGGGCTT TCGGGCCGGA TTGTTTTTCG CCCGGAGCTG GAGGATATTC CCACCCTGGT AATGCCCTGC ATTCTTCTGC TGACCCGCGA TCGCTCATGT GTGCTGACAG GCATGAAAGA CGGCATGGCC GAGGTCATAT TTCCTGAAAC CAGCGATGCC GCGCAGGCGG TGTCTCTTGA AGATCTCAAG CAGGAATACT CCGGTTACGC ACTCTTTGCC GCTGTGGAAT CCGCACCCGA TGACCGCGCC GAGCGGCTGA GCATTTCGCA CGGCAAGCGC TGGTTCTGGG ATGTGCTGCG TTATTACGCG CCCATTTACC GGCATGTGGC TCTGGCCAGT GTGGTGATCA ACCTCATTGC CGTGGGCAGC CCGCTTTTTG TCATGAACGT CTACGACCGC GTGGTTCCCA ATAATGCCAT TGAAACCCTG TGGGTTCTGG CTATCGGCAT TCTCATAATC TATCTCTTCA ACTTTTTGCT CTCGTCGTTG CGTACCCATT TTGTGGACGT GGCCGGGCGC AATGCCGACA TTGTGCTTTC GAGTTCGCTG GTAGAGAAAG TGCTTTCAAT GCGCATGGAC GCCAAGCCAG AATCCACAGG GGCACTTGTT AATAACCTGC GTGAATTCGA GCAGTTACGC GAATTTTTCA GCTCTTCAAG CCTGCTGGCC TGCATTGATC TGCCTTTTCT GGTCATATTC CTGCTGCTTA TCGGATTTAT CGGCGGCCCG CTGGTATTCT TGCCTCTGGC GGCAATGCCC CTGATGCTGG GCATCGGCCT GCTGCTGCAG TCGCGCTCGC GGCGCAGTGC CGAGGCCAGT TACAAGCAGA ATATGCAGAA AAACGCCCTG CTGGTGGAGA TTGTGGGCGG GCTTGAAACC CTCAAGTCGT GCATGGCCGA AAGCCGCATG CAAAAGCTCT GGGAATCTGT GGTGGGGCTT TCCGCCCAGT CCAACAGCGA GGCCCGCAAG TACAACAATC TGGCCGTCAC GTCTTCCATG CTCATTACCC AGCTTGTGAC GGTGGCCATG ATCGTTTGGG GCGTGTACCG CATATCCGAC GGCCTGATGA CCATGGGCGC CCTTATAGGC TGCAATATTC TGGTGGGGCG GACCATGGCC CCTCTGCTGC AGATGGCCTC GCTGCTTACG CGCCTTCAGA ACTCGCATGT GACGCTCAAG GCGCTCGACA TGCTCATGGT GCTGCCTTCA GAAAACCAGG TGGAAAAAAC CTGCATGGAT TTCGGCATGC TGCGGCCGTC ATTCACTATG GAAAACGTGT CCTTCGCTTA CCCGCAGCAG GAGCGTCTGG CCCTTGACCG CGTATCGCTG CATATCGAGC CGGGCGAGCG TGTGGGCATC ATCGGGCCTA TGGGGTCGGG CAAGAGCACA CTGTCCAAGC TGCTTATCGG CCTTTATCAG CCCAAGGAAG GCGCCGTGAA ATTCGGCGAT GTGGACATAC GGCAGATACC CAGCACCGAC CTCAGGGGAC GCGTGGGCGT ACTGCCGCAG GACGTGGTGC TGTTTTACGG CAGCATTCGC GACAATATTG CTCTGGGCGA TCCCACCATC AATGACCATC TTATCCTGCG CGCAGCGGCT CTGGCGGGTG TGACAGACTT TTTGCGCAAC AATCCCGCTG GTTTTGCCGC GCAGGTGGGT GAACAGGGCA GGGCTCTTTC CGGCGGGCAG CGTCAGGCTG TGGCGCTGGC GCGCGCCCTT GTGCGCGACC CCGAAGTGCT GCTTCTGGAT GAGCCTACCA GCAACATGGA TACGGACTCT GAGGTAATGC TGCAAAAGCG CCTGTATTCG GTCATGGATG GGCGCACCGT GGTGCTGGTG ACACACCGCT TGTCCATGCT GCGTATTGTA AATCGCCTGA TTGTTATGGA AAACGGCCAA ATAAGAATGG ATGGCCCGCG CGACGCCGTT TTGCAGCGTC TGCGTGACCG TTCACGGCAA AGCATGGATA CGGCACGACA GGGACAGGGC GCTCCGGCGC AACGGCCCGC GGAGAATATG TAG
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Protein sequence | MEQPDTTQIS GKTPDGTAAS ATANGAAPTP ASATSSAAGT HAASIGPASP GSGSATQNAG LSQLSGAVTI LPGQQAKEAA PASGQEGMPP GMPNGSAVLG NAHPRTEAFS ERDAAAAASA EVAAPAQDAG TAGTQPQSAA EAGAVPDAEG APAPGDAQGV SGQTGEAAMN AMAQAARHEA AMKSGQSGRD SGMGPLRPSD VDFMPGLLRS LAVLLRLRGR VVSPQFLMAG LTGSKVTPQA CLRAARKAGL SGRIVFRPEL EDIPTLVMPC ILLLTRDRSC VLTGMKDGMA EVIFPETSDA AQAVSLEDLK QEYSGYALFA AVESAPDDRA ERLSISHGKR WFWDVLRYYA PIYRHVALAS VVINLIAVGS PLFVMNVYDR VVPNNAIETL WVLAIGILII YLFNFLLSSL RTHFVDVAGR NADIVLSSSL VEKVLSMRMD AKPESTGALV NNLREFEQLR EFFSSSSLLA CIDLPFLVIF LLLIGFIGGP LVFLPLAAMP LMLGIGLLLQ SRSRRSAEAS YKQNMQKNAL LVEIVGGLET LKSCMAESRM QKLWESVVGL SAQSNSEARK YNNLAVTSSM LITQLVTVAM IVWGVYRISD GLMTMGALIG CNILVGRTMA PLLQMASLLT RLQNSHVTLK ALDMLMVLPS ENQVEKTCMD FGMLRPSFTM ENVSFAYPQQ ERLALDRVSL HIEPGERVGI IGPMGSGKST LSKLLIGLYQ PKEGAVKFGD VDIRQIPSTD LRGRVGVLPQ DVVLFYGSIR DNIALGDPTI NDHLILRAAA LAGVTDFLRN NPAGFAAQVG EQGRALSGGQ RQAVALARAL VRDPEVLLLD EPTSNMDTDS EVMLQKRLYS VMDGRTVVLV THRLSMLRIV NRLIVMENGQ IRMDGPRDAV LQRLRDRSRQ SMDTARQGQG APAQRPAENM
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