| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0634 |
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| Symbol | |
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| ID | 7284306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 763837 |
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| End bp | 765240 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643581429 |
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| Product | type I secretion outer membrane protein, TolC family |
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| Protein accession | YP_002479221 |
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| Protein GI | 220903909 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000541353 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGACAGT ATGTTTTTAC CTTCTTGGGG CTGATTCTGC TGGCCCCGGC GCTGACTGTA
GCTGCCGAAA GCGCATATCC GCCTCCTCCG CCCGCAGGGC AGGCCATAAC CGTGGAAGAT
TCCATTTATG GCGTGCTGCG TACCAACAGG GCCTTGAGGG GGATTCAGGA AAACCGCAAT
GTGCTTGAGC ACGAAGTTGA CCGCGCCAAA GCCGGGTTCG GCCCCCGCGT GGACGTTACG
GGGCGCGCTG GCGGCAGTGT GTTGAGCGAT TCGAGCACAC GCAATAAAGA CCTGGACTAT
CAGATGTGGG GCCTGGCCGG CGTTAACGCC CAGCTTGTGC AGCCTATCTG GGACGGTTTT
GCCACGCGTT CGCGTGTGCG CACGGCCAAG TCTACCCTTG AGTCCGTAAA GTATCGCGTG
TTTGATACGG CCACTTCGCT GTCCCTTGAA GGTATCATTT CGCATATCGA CGTTCTGCGC
CGCAGAAAGA TCCTTGAACT GGCCGAAATG AACGTAAGCC AGCACAAGGC GCTTGTGAAC
CAGGCACAGG ACAGGGCCAG CCTTGGCGCT GATACCGCCG CCGACGTGAC GCAGGCCCGT
TCGCGCCTGC AGCGCGCCCT GTCGAGCCTG TCCGAGGCCA AGGCCGCCCT TCTTGTGGCG
GAAGACAGGT ATGTTCGCCT TACTGGGCTG CCCGCCGCGG CCAAAATGGC CCCTGTGACG
ATGCCCCCCG AGCTGTATAA AGGCCCGGAT GCGGTACTGA CACAGGCCGA GCAGAGCAAC
CCCAAGCTGT CTGCCTACAT GCAGGACATC CGCGCCGCGC GCGGCGAGCG TGAGCTGGCC
GACTCCGCCT TTTATCCCAC GCTGAACCTT GAAGCCGGCC CCAACTATAC GGACAGGGGC
GGAGCTACCG ACCGCTGGAT ATACAGCTTT GACGTGCTTG GCGTCGTGCG CTGGAATATC
TTCAATAGCG GAGCGGACCT GGCCGAACGG CGTGCGGCTT CAGCGCGCAT CCGGCAGAGC
CGCCAGGTGA TGTACGATTT TCTTGATGAG CTGAAGCTGG ATATCGAAAG CACCTGGACC
AACTATCAGG CCGCGCAGGA ACAGTACTCG CACTACAGCA AGGCTGTGGA GTACAGCAAG
TACACCCGCT CGGCGTATGT TGAACAGTTC CAGATCGGCA GGCGCAGCAT TCTTGACGTG
CTCGACACGG AGAATGAGCT TTTCAACTCC TCCACCCAGG CCGAAACCGC TCGCGGCAAT
ATCCTGGTGG GCGCGTATCG CCTGAGCGCG CTTTCGGGCA ACCTGCTGCC GCAAATGTCC
ATTAATACCG GTCCCCTTGG GCAGGAACCG CCCAAGGACG CCACTGACCC CCGCGAAGAA
TTCGCTCCCG GCTGGTTTGA GTAA
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| Protein sequence | MRQYVFTFLG LILLAPALTV AAESAYPPPP PAGQAITVED SIYGVLRTNR ALRGIQENRN
VLEHEVDRAK AGFGPRVDVT GRAGGSVLSD SSTRNKDLDY QMWGLAGVNA QLVQPIWDGF
ATRSRVRTAK STLESVKYRV FDTATSLSLE GIISHIDVLR RRKILELAEM NVSQHKALVN
QAQDRASLGA DTAADVTQAR SRLQRALSSL SEAKAALLVA EDRYVRLTGL PAAAKMAPVT
MPPELYKGPD AVLTQAEQSN PKLSAYMQDI RAARGERELA DSAFYPTLNL EAGPNYTDRG
GATDRWIYSF DVLGVVRWNI FNSGADLAER RAASARIRQS RQVMYDFLDE LKLDIESTWT
NYQAAQEQYS HYSKAVEYSK YTRSAYVEQF QIGRRSILDV LDTENELFNS STQAETARGN
ILVGAYRLSA LSGNLLPQMS INTGPLGQEP PKDATDPREE FAPGWFE
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