| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0628 |
|---|
| Symbol | |
|---|
| ID | 7284300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 756204 |
|---|
| End bp | 757484 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643581423 |
|---|
| Product | thiamine biosynthesis protein ThiC |
|---|
| Protein accession | YP_002479215 |
|---|
| Protein GI | 220903903 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
|---|
| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACCA CACTTTTTTC GCAGAATACC GCATTGCGCG GTCTTCTGGA CTCCCATCTG
GACAGCCTGT CCGCTGAAGA GCAGCTCGAC GCCCAAAGCG TGACCGCCGC CCTTGAGGCC
GGAACTATGG TGCTGCTGGG CAACCCCGCC CATAAGGGAC TCAAACCCAT TCTTGTGGGT
CAGCCCGCCA GGGTCAAGGT GAACGCCAAT ATCGGCACGT CTCCCCTGAA CAACTGCCCC
CGCACCGAGG AGCGCAAGAT ACAGGCCGCC CTTGAAGCCG GAGCCGATAC GGTTATGGAT
CTTTCCATCG CCGGCGATCT GGACGCCCTG CGCCTCGGCA TGCTGGAGGC CTGCCCCCGG
CCGCTGGGTA CGGTTCCCCT GTACGCCGTG GGCCAGCGCA TACTGGACGC GGAGCGCGAC
ATTGCCAGCA TGAACCCGGA CGAGCTTTTT GACGAAATCG CCAAACAGGC CCGGCAAGGG
GTGGATTTTG TCACCGTTCA CTGCGGGCTT TCGCGGCGCG GAGCCGAAAT GGCCGTCAAA
AACAACCGCG CTCTGGGCAT TGTCTCGCGC GGCGGCTCCA TGCTGGCCCG CTGGATGCTC
GAAAACGACC GCGAAAACCC CTTGCTGGAG CATTTTGACC GCCTGCTCGA CATCTGCCTT
CCCTACAACG TGACCCTCTC CCTCGGCGAC GGACTGCGCC CCGGCGCGGG CGTTGATGCG
GGCGATGCCG CCCAGTGGGA AGAGGTCATC AATCTGGGGC GCCTTGCCAG ATACGCGCTT
GAACGCGGCG TGCAATGCAT GATTGAAGGC CCCGGCCACG TGCCCCTCAA CCAGGTGCGC
ACCCAGATTC AGGGCATAAA GCGCCTCACC CATAATGCCC CGCTCTATGT TCTCGGCCCC
CTGTGCTGCG ACAGCGCGCC GGGCTACGAC CATATCGCCG GAGCCATCGG CGGCGCACTA
GGCGTGGAAG CAGGCGTGGA CTTTCTCTGC TACCTCACCC CTGCCGAGCA CCTCACCCTG
CCTGACGAGG CAGACGTGCG CGCCGGGGTC ATGGCTTCGC GCGTGGCCGG GCATGTAGGC
GAAGTGGCTT TGGGCCACCC CCGCGCCGTG GCACGTGAGG CAGCCATGAA CGCCGCTCGC
AAGGCGCTGG ACTGGGAAGG CATGACCAAA GCCGCCCTGG ATCCACAAAT GCTTGAAAAA
CGGCGTGAGG AGCACAAGAC TGAAGAAGTC TGCGCCATGT GCGGCAAGTT CTGCGCGGTC
AAGATGCTTC AGGATCACTA G
|
|---|
| Protein sequence | MSTTLFSQNT ALRGLLDSHL DSLSAEEQLD AQSVTAALEA GTMVLLGNPA HKGLKPILVG
QPARVKVNAN IGTSPLNNCP RTEERKIQAA LEAGADTVMD LSIAGDLDAL RLGMLEACPR
PLGTVPLYAV GQRILDAERD IASMNPDELF DEIAKQARQG VDFVTVHCGL SRRGAEMAVK
NNRALGIVSR GGSMLARWML ENDRENPLLE HFDRLLDICL PYNVTLSLGD GLRPGAGVDA
GDAAQWEEVI NLGRLARYAL ERGVQCMIEG PGHVPLNQVR TQIQGIKRLT HNAPLYVLGP
LCCDSAPGYD HIAGAIGGAL GVEAGVDFLC YLTPAEHLTL PDEADVRAGV MASRVAGHVG
EVALGHPRAV AREAAMNAAR KALDWEGMTK AALDPQMLEK RREEHKTEEV CAMCGKFCAV
KMLQDH
|
|---|
| |