Gene Ddes_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0612 
Symbol 
ID7284284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp741021 
End bp741707 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content55% 
IMG OID643581407 
ProductABC transporter related 
Protein accessionYP_002479199 
Protein GI220903887 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0037706 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCAC TCTACAAATT TTCCGATGTG AACAAAATTT TTTCCGCACC CGGGGAAAAT 
CTTGAAATTC TCAAAGATAT CAGCCTGGTT GTGAACGAAG GCGAAGCTCT TGCCATTGTG
GGGGCTTCCG GTTCGGGCAA AAGCACCCTC TTGCATCTTA TGGGTGCTCT TGATACTCCA
AGTACGGGCG CCGTCTATTT TGACGGGCAG GACATGGCCC ACATGACACC TGACCAGAAA
GCGGCCTTCC GCAATAAAAC CTTGGGCTTC GTTTTTCAGT TTCATCACCT TTTGCCGGAG
TTTTCGGCAG TGGAAAACGT GGCAATGCCG GCCATCATCG GCGGTGAACG CCAGTCAGCC
GTTATGCCCA AGGCCCGGGA AATGCTTGAA CGCGTCGGCC TTGCGGCCCG TATGGACGGC
AAGGTAGCCA CACTTTCCGG CGGCGAGCGG CAAAGGGTAG CCATCGCCCG CTCGGTGCTG
ATGCGCCCGC GCGTGCTGTT GGCTGACGAA CCCACCGGCA ATCTGGACGA ACATACTGGA
GAGCAGGTGG GCGCGCTTAT GAATGAACTT AACCGCGAGC TGGGCATGAC TCTCGTGGTC
GTGACGCATA ATCGGGAACT GGCCGCGGGT ATGGGCCGCA TCCTGGAACT GAAAGCGGGG
ACACTGTATG AAAAAAATCT TGCGTAA
 
Protein sequence
MSALYKFSDV NKIFSAPGEN LEILKDISLV VNEGEALAIV GASGSGKSTL LHLMGALDTP 
STGAVYFDGQ DMAHMTPDQK AAFRNKTLGF VFQFHHLLPE FSAVENVAMP AIIGGERQSA
VMPKAREMLE RVGLAARMDG KVATLSGGER QRVAIARSVL MRPRVLLADE PTGNLDEHTG
EQVGALMNEL NRELGMTLVV VTHNRELAAG MGRILELKAG TLYEKNLA