Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0612 |
Symbol | |
ID | 7284284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 741021 |
End bp | 741707 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643581407 |
Product | ABC transporter related |
Protein accession | YP_002479199 |
Protein GI | 220903887 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0037706 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCAC TCTACAAATT TTCCGATGTG AACAAAATTT TTTCCGCACC CGGGGAAAAT CTTGAAATTC TCAAAGATAT CAGCCTGGTT GTGAACGAAG GCGAAGCTCT TGCCATTGTG GGGGCTTCCG GTTCGGGCAA AAGCACCCTC TTGCATCTTA TGGGTGCTCT TGATACTCCA AGTACGGGCG CCGTCTATTT TGACGGGCAG GACATGGCCC ACATGACACC TGACCAGAAA GCGGCCTTCC GCAATAAAAC CTTGGGCTTC GTTTTTCAGT TTCATCACCT TTTGCCGGAG TTTTCGGCAG TGGAAAACGT GGCAATGCCG GCCATCATCG GCGGTGAACG CCAGTCAGCC GTTATGCCCA AGGCCCGGGA AATGCTTGAA CGCGTCGGCC TTGCGGCCCG TATGGACGGC AAGGTAGCCA CACTTTCCGG CGGCGAGCGG CAAAGGGTAG CCATCGCCCG CTCGGTGCTG ATGCGCCCGC GCGTGCTGTT GGCTGACGAA CCCACCGGCA ATCTGGACGA ACATACTGGA GAGCAGGTGG GCGCGCTTAT GAATGAACTT AACCGCGAGC TGGGCATGAC TCTCGTGGTC GTGACGCATA ATCGGGAACT GGCCGCGGGT ATGGGCCGCA TCCTGGAACT GAAAGCGGGG ACACTGTATG AAAAAAATCT TGCGTAA
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Protein sequence | MSALYKFSDV NKIFSAPGEN LEILKDISLV VNEGEALAIV GASGSGKSTL LHLMGALDTP STGAVYFDGQ DMAHMTPDQK AAFRNKTLGF VFQFHHLLPE FSAVENVAMP AIIGGERQSA VMPKAREMLE RVGLAARMDG KVATLSGGER QRVAIARSVL MRPRVLLADE PTGNLDEHTG EQVGALMNEL NRELGMTLVV VTHNRELAAG MGRILELKAG TLYEKNLA
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