| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0602 |
|---|
| Symbol | |
|---|
| ID | 7284274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 729384 |
|---|
| End bp | 729950 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643581397 |
|---|
| Product | peroxiredoxin |
|---|
| Protein accession | YP_002479189 |
|---|
| Protein GI | 220903877 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0450] Peroxiredoxin |
|---|
| TIGRFAM ID | [TIGR03137] peroxiredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATC TGATCAATTC CAAGGTTGAA CCCTTCAATG TGCAGGCATA TCATCTGGGT
GAGCTGAAAA ATGTATGCGA CACAGACCTG CTGGGGCACT GGTCCATTTT CTTTTTTTAC
CCTGCCGACT TTACTTTTGT ATGCCCCACA GAGCTTGAAG ACCTGTCGGA CACCTACGAA
GACTTCAAAA AACTCAATTG CGAAATTTAC TCTGTCTCTA CAGACAGCGC CTTTGTGCAT
AAAGCCTGGG CCGATGCTTC CCCAAGCATA GCCAAAATCA GATACCCCAT GCTGTCCGAC
AGTGCGGGCA CCCTTTCACG CGCTTTTCAT GTGCTGATTG AAGAGGCCGG TCAGGCCCTG
CGCGGCAGCT TTATTGTAAA CCCCGAAGGC ATCATCAAAG CTTACGAAGT GCACGACCTC
GGCATCGGCC GCAATGCCGA AGAGCTGCTG CGCAAGCTTG AAGCAGCCCA GTTTGTGGCC
CAGCACGGCG ATCAGGTATG CCCCGCCCGC TGGAAGCCCG GCAAGTCCAC CCTTAAGCCC
GGCCTTGACC TGGTGGGCAA GCTGTAG
|
|---|
| Protein sequence | MANLINSKVE PFNVQAYHLG ELKNVCDTDL LGHWSIFFFY PADFTFVCPT ELEDLSDTYE
DFKKLNCEIY SVSTDSAFVH KAWADASPSI AKIRYPMLSD SAGTLSRAFH VLIEEAGQAL
RGSFIVNPEG IIKAYEVHDL GIGRNAEELL RKLEAAQFVA QHGDQVCPAR WKPGKSTLKP
GLDLVGKL
|
|---|
| |