Gene Ddes_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0575 
Symbol 
ID7284247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp694769 
End bp695659 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content64% 
IMG OID643581371 
ProductRadical SAM domain protein 
Protein accessionYP_002479163 
Protein GI220903851 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID[TIGR01290] nitrogenase cofactor biosynthesis protein NifB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATAG CCCAGGCCGA CAGTGCGCGG CATCCCTGTT TCAATGCCGA GGCCCACCGC 
TCCTTCGGCA GGGCGCACCT GCCTGTGGCT GCGGGCTGCA ATGTGCAGTG CGGATTTTAC 
GACCGCCGCT ATTCCTGCGT CAACGAATCG CGCCCGGGCG TTACAGCCCG GCTGCTGGAG 
CCGGAAGAAG CCCTTGAGGC CGCCCTGCGT GCCGTAAAGC AGATGCCGCA CCTGAGCGTC 
ATCGGCATTG CCGGCCCCGG CGACCCCCTG GCAGACGCCG GGCGCACACT GCACACACTG 
GAAGCATTGC GCAAGGCACT GCCCCACATT CTGCTTTGTC TGTCCACCAA TGGCCTTGCC 
CTGCCGCTGC ATGCTGCGGC CCTGTCGTCT TTGGGGGTGG GGCATGTGAC AGTTACCGTC 
AATGCGGTTG ACCCATCCAT TGGCGCAGAC ATTTACACCT GGGTGAGCGA TGGCGCGCGC 
AGGCTGACGG GAACAGACGC CGCGGCCCTG CTGCTTGAAC GGCAGGAAGA AGGAATACGC 
CGCCTCAAGG CAGCGGGGGT AACCGTAAAA ATAAACTCCG TGGTTATCCC GGGCATCAAC 
GACAGGCACG TGCAGGCTGT CGCCCAAGCG GTGTCTTCCT GGGGAGCAGA CCTTATGAAC 
TGCATTCCCC TGTTGCCTGT GCAGGGAACC CGGTTTGCCC GCACGCCCTC ACCGGACCCG 
CAAATGATGC GCCGCCTGCG GGACGAGGCC GCCATACTCA TCCCCCAGAT GCGCCACTGC 
ACACGCTGCC GCGCCGATGC GCTGGGCCTT CTTGGCGAAG AAGGACAACT GGAGGATGTC 
TGCCACGGGC CGCTGCCCGC ACACCGGAAA CTTCATGCCT GCGGTCAGTG A
 
Protein sequence
MTIAQADSAR HPCFNAEAHR SFGRAHLPVA AGCNVQCGFY DRRYSCVNES RPGVTARLLE 
PEEALEAALR AVKQMPHLSV IGIAGPGDPL ADAGRTLHTL EALRKALPHI LLCLSTNGLA 
LPLHAAALSS LGVGHVTVTV NAVDPSIGAD IYTWVSDGAR RLTGTDAAAL LLERQEEGIR 
RLKAAGVTVK INSVVIPGIN DRHVQAVAQA VSSWGADLMN CIPLLPVQGT RFARTPSPDP 
QMMRRLRDEA AILIPQMRHC TRCRADALGL LGEEGQLEDV CHGPLPAHRK LHACGQ