Gene Ddes_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0559 
Symbol 
ID7284231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp676786 
End bp678090 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content61% 
IMG OID643581355 
ProductPhenylacetate--CoA ligase 
Protein accessionYP_002479147 
Protein GI220903835 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID[TIGR02155] phenylacetate-CoA ligase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.589341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTTTCG ACATCAAACA GGAAACCCTG CCCCGCGAGG AAATGGAAGC ATTGCAGTTG 
CGTCGTCTGC GCGACCTGTG CAACCGCGTT TACGCCAACG TGCCTTTCTA CCGCAAACGC
TTTGACGAAG CGGGCATATC CCCCGCAGAC ATCAAGTCGC TGGCCGATCT GAAGCTTCTG
CCCTTCACCG AAAAACAGGA CCTGCGCGAC TACTACCCTT TCGGCCTTTT TGCCGTGCCG
CGCGACCATA TCGTGCGTCT TCACGCCTCC AGCGGAACAA CGGGCAAGGC CGTGGTAGTG
GGCTACACAG CCCGCGACCT TGAAACCTGG GCCGAACTTA TGGCCCGCAG CATGTCCGCC
GCAGGCGTCA GCCGCTCGGA TGTGGTACAT ATAGCTTATG GCTACGGCCT TTTTACCGGC
GGGCTTGGGG CGCACTACGG CGCGGAACGC ATCGGCGCCA CGGTGGTTCC CGCGTCCGGC
GGCGCCACAC GCCGTCAGGC GCACCTGATG CGCGACTTCG GAGCCACCGT GCTGTGCGCC
ACCCCCTCTT ACGCCCTGCA CCTCTGGGAA GCCGCCAACG AGGCCGGGGT GGATTTTCGC
GAACTGTCGC TGCGCACAGG CATTTTCGGC GCGGAGCCAT GGTCCGAAGC CATGCGCCGT
GACATTGAGG AAAAGATGGG CATGGACGCC ATGAACATCT ACGGCCTGTC TGAAATAATG
GGACCCGGCG TGGCAATGGA ATGCGTTGAG GCAAAGCACG GTATGCACCT GTGGGAAGAC
CACATCCTGC CGGAAATTAT CGACCCCGTC ACCGGCGAGC AGCTGCCTCC GGGCCAGGTC
GGCGAACTGG TGCTGACCAC CCTCACCAAA GAGGGCATAC CCATGCTGCG CTACCGCACC
CGCGACCTCA CAAGCCTTGA TTATACCCCC TGCCGCTGCG GGCGCACCCA TGTGCGCATT
TCGCGTCTTC AGGGCCGCAG CGACGACATG CTTATCATCC GCGGGGTCAA TGTCTTTCCG
CAGCAGATCG AAGGCCTGCT TATGGAAAGC GACGGCCTTA CGCCCAACTA TCAGATCATT
GTGGGCACAT CCAACAACCT CGACACCCTT GAGGTGCGTG TGGAAGTCAG CGACACCCTG
TTTGCCGACG AAATACGCAA ACTGCAAATG CTTGAGAACC GCCTGCAAAA AAGCATCAAA
GAATTTCTGG GTGTTTCGGC CAAGGTGCGC CTGATGGAAC CGCGCTCCAT CCAGCGCTCT
GAAGGCAAGG CCCAGCGCAT CGTGGACCAG CGCGAAAAGC CGTAG
 
Protein sequence
MLFDIKQETL PREEMEALQL RRLRDLCNRV YANVPFYRKR FDEAGISPAD IKSLADLKLL 
PFTEKQDLRD YYPFGLFAVP RDHIVRLHAS SGTTGKAVVV GYTARDLETW AELMARSMSA
AGVSRSDVVH IAYGYGLFTG GLGAHYGAER IGATVVPASG GATRRQAHLM RDFGATVLCA
TPSYALHLWE AANEAGVDFR ELSLRTGIFG AEPWSEAMRR DIEEKMGMDA MNIYGLSEIM
GPGVAMECVE AKHGMHLWED HILPEIIDPV TGEQLPPGQV GELVLTTLTK EGIPMLRYRT
RDLTSLDYTP CRCGRTHVRI SRLQGRSDDM LIIRGVNVFP QQIEGLLMES DGLTPNYQII
VGTSNNLDTL EVRVEVSDTL FADEIRKLQM LENRLQKSIK EFLGVSAKVR LMEPRSIQRS
EGKAQRIVDQ REKP