| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0555 |
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| Symbol | |
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| ID | 7284223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 669447 |
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| End bp | 672485 |
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| Gene Length | 3039 bp |
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| Protein Length | 1012 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643581347 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_002479143 |
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| Protein GI | 220903831 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCA CTCGACGGAG TTTTCTCAAA GGTGTCGGTG CAGGGGTATT ATGCCTTACG
CTGGGGCACC TGGGTTTTGA CCTGGGCGAG GCCCAGGCAT ACGCCGGCAA ACTCAAGATC
GAGGGTGCCA AGGAAGTATC GAGCATTTGC CCCTTCTGTT CTGTTCAGTG TCAGATCATC
GCTTACGTCA AGGGCGGCAA GCTTGTCTCC ACTGAGGGCG ATCCGGACTT TCCCATCACC
GAAGGCGCGC TCTGCGCCAA GGGCGCGGCG CTGTACTCCA TGTACACCAG CGACCACCGC
CTGATGAAAC CCATGTATCG CGCTCCGTTC AGCGACAAGT GGGAAGAAAA AGACTGGGAC
TGGACCCTTG AGCAAATAGC GCGCCGCGTC AAGGACGCAC GCGATAAGGA TATGATCCTT
AAAAACGACA AAGGGCAGAC GGTCAACCGT CTGGAAACCA TCTTCTGGAT GGGAACCTCG
CACGCTTCCA ACGAAGAGTG CGCTGTTATC CATCAAGCCT TGCGCGGCCT GGGTGTTGTC
CATATGGACC ACCAGGCGCG GGTCTGACAC AGCCCCACTG TTGCGGCTCT GGCAGAGTCG
TTCGGACGCG GTGCAATGAC CAACCACTGG ATCGACATCA AGAATGCCGA TGCGGTGCTT
ATTATCGGCA GTAATGCCGC TGAACATCAT CCCGTGGCTT TCAAATGGAT CATGAAAGCC
AAGGACAACG GGGCCGTGCT CATGCACGTG GACCCCAAGT TCTCGCGCAC ATCCGCCAGG
TGTGATTTCC ATGTGCCCCT TCGCTCGGGT ACGGACATCC CCTTCCTGGG CGGCATGCTC
AACTACATCC TTGAAAACGG TTTGTACCAC AAGGAGTACG TTAACAACTA CACCAACGCG
GCCTTTGTGG TGGGTGACGG CTACGCCTTT GAAGACGGGC TTTTCAGCGG CTATGATGCC
GCCGCCCGCA AGTATGACAA AAGCAAGTGG GCCTTGGCCA AGGGGCCTGA CGGCGGGCCT
GTCGTGGATC CCACACACCA GAACCCGCGC TGCGTCATCA ACCTCATGAA GGACCATTAC
TCCCGCTACA CGCTTAAAAA CGTCTCCGAC GTCACGGGCG TTTCGCAGGA CAACCTGCTC
AAGGTGTACA AGAACTTCTG CGCTACCGGC AGGCCGGACA AGGCGGGAAC CATTCTTTAC
GCTCTGGGCT GGACACAGCA TACAGTAGGC GTGCAGAACA TCCGCCTTTC GAGTCTTGTG
CAGCTCTTGC TGGGCAACAT AGGCATCGCC GGGGGCGGCA TCAACGCGCT ACGCGGCGAA
CCTAACGTGC AGGGCTCGAC CGACCATGCC CTGCTGTACA ACAACATTCC CGGCTACCAC
GGCACACCCC AGGCTCCGTG GCAGACCCTG GGCGAATACA ACAAGGCCAA TACCCCGGTA
ACGGTGGTGC CTAACAGCGC CAACTGGTGG GGCAACAGGC CCAAGTATGT GACAAGTCTG
CTCAAGGGCT GGTTCGGCGA TGCCGCCACC CCCGAAAACG ACTTCTGCTA CAGCCTGCTG
CCCAAGCTGG AGCCGGGCGT GGACTATTCG TACATGTTCG TCATGGACAG GATCTATAAC
AAGAAGATCA AGGGCGGCTT CATCATGGGT GTAAACCCCA TGAACAGCTT CCCCAACACC
AACAAGATGC GGGCAGCCCT GGACAATCTT GACTGGCTGG TCTGTTCCGA AATCCATAAT
TCGGAAACCA CGGATAACTG GCAACGCCCC GGCGTGGACC CCAAGACCAA GAAGACCGAG
GTCTTTTTGC TGCCTTCGGC CCATCGCATC GAAAAGGCGG GAACCATCAG CAACAGCGGG
CGCTGGCTGC AGTGGTTCGA CAAGGCCGTG GAACCCGCCG GAGAGGCGCG CAACTTCGCT
GACGTGGTCG TGCCGCTCTT CAACACCATC CGCCGCATGT ACAAGACAGA GGGCGGGGTA
CTGCCCGAAG CCGTGCTGCA GATGCACTGG ACGGACAAGT ATGATCCTGA AGACTGGGCC
AGGCGCATCA ACGGTTTCTT CTGGGCCGAC ACCAAGGTGG GCGACAAGAC CTATAAGCGC
GGGCAGCTTG TACCCGCCTT CGGCGCGCTC AAGGATGACG GAACCACGTC TTCCCTCAAC
TGGATATACA CCGGAAGCTG GACGGAAGAA GACGGCAACA AGTCGCGGCG GCGCGATCCC
AGCCAGACGC CCATGCAGGC CAAGATAGGC CTCTTCCCCA ACTGGTCGTG GTGCTGGCCG
CTCAACAGGC GCATCCTGTA CAACCGCGCC TCGGTGGACA TGAACGGCAA GCCCTTCAAC
CCCAACAGGG CTGTTATCGA ATGGGACGGC AGCAAATGGG TGGGCGACGT GCCCGACGGC
CCCTGGCCGC CCATGGCTGA CCCCAAGGGC AAGCTGCCCT TTATCATGGT CAAGGACGGC
CTTGCCCAGT TCTATGGTCC CGGCCCGGCT GACGGTCCGT TCCCCGAGCA CTACGAACCT
GCTGAAACGC CCCTGGCGAC CCATCCGTTC TCCAAGCAGC TCAGCAGCCC GGTATATAAA
TACCACAAGA CCGACATGGA CCAGATCGCG CCTCCGGCCG ATCCGCGTTA CCCCATAGTG
CTGACCACCT ACAGCCTTAC CGAGCACTGG TGTGGCGGCG GTGAAACGCG CAACGTGCCC
AACCTGCTGG AAACAGAGCC GCAGCTTTAT GTGGAAATGA GCCACGAGCT GGCCAAGGAA
AAGGGCATCA AGAACGGCGA CGGGGTCGTG CTTGAAAGCG CGCGCGGCAA CTGTGAGGCC
ATCGCCATGG TAACGGTGCG TATACGTCCC TTCACGGTTA TGGGCAAAAC TGTCCACCTG
GTGGGTATGC CCTTTGCCTT TGGCTGGACA ACGCCAAAAA CCGGCGACTC CACCAACAGG
CTTACCGTTG GCGCGTATGA TCCCAATACT ACCATTCCCG AGTCCAAGGC CTGCTGCGTA
AACCTGCGCA AGGCTGATAA ACTCACCGAA ATAGGCTAA
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| Protein sequence | MKSTRRSFLK GVGAGVLCLT LGHLGFDLGE AQAYAGKLKI EGAKEVSSIC PFCSVQCQII
AYVKGGKLVS TEGDPDFPIT EGALCAKGAA LYSMYTSDHR LMKPMYRAPF SDKWEEKDWD
WTLEQIARRV KDARDKDMIL KNDKGQTVNR LETIFWMGTS HASNEECAVI HQALRGLGVV
HMDHQARVUH SPTVAALAES FGRGAMTNHW IDIKNADAVL IIGSNAAEHH PVAFKWIMKA
KDNGAVLMHV DPKFSRTSAR CDFHVPLRSG TDIPFLGGML NYILENGLYH KEYVNNYTNA
AFVVGDGYAF EDGLFSGYDA AARKYDKSKW ALAKGPDGGP VVDPTHQNPR CVINLMKDHY
SRYTLKNVSD VTGVSQDNLL KVYKNFCATG RPDKAGTILY ALGWTQHTVG VQNIRLSSLV
QLLLGNIGIA GGGINALRGE PNVQGSTDHA LLYNNIPGYH GTPQAPWQTL GEYNKANTPV
TVVPNSANWW GNRPKYVTSL LKGWFGDAAT PENDFCYSLL PKLEPGVDYS YMFVMDRIYN
KKIKGGFIMG VNPMNSFPNT NKMRAALDNL DWLVCSEIHN SETTDNWQRP GVDPKTKKTE
VFLLPSAHRI EKAGTISNSG RWLQWFDKAV EPAGEARNFA DVVVPLFNTI RRMYKTEGGV
LPEAVLQMHW TDKYDPEDWA RRINGFFWAD TKVGDKTYKR GQLVPAFGAL KDDGTTSSLN
WIYTGSWTEE DGNKSRRRDP SQTPMQAKIG LFPNWSWCWP LNRRILYNRA SVDMNGKPFN
PNRAVIEWDG SKWVGDVPDG PWPPMADPKG KLPFIMVKDG LAQFYGPGPA DGPFPEHYEP
AETPLATHPF SKQLSSPVYK YHKTDMDQIA PPADPRYPIV LTTYSLTEHW CGGGETRNVP
NLLETEPQLY VEMSHELAKE KGIKNGDGVV LESARGNCEA IAMVTVRIRP FTVMGKTVHL
VGMPFAFGWT TPKTGDSTNR LTVGAYDPNT TIPESKACCV NLRKADKLTE IG
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