Gene Ddes_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0542 
Symbol 
ID7284210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp653505 
End bp654044 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content60% 
IMG OID643581335 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_002479131 
Protein GI220903819 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTAG CGGCAACGCC TCTGGCCGGA GTCATGCTTA TAAAGCCCAG GGTATGGGGT 
GACAGGCGGG GCTATTTTGT CGAGACCTGG CAGCATGAAC GGTACGCGGC TGCGGGCATT 
GACGCGGCTT TTGTGCAGGA TAACCATTCC ATGTCGACGT ATGGCATATT GCGCGGCCTA 
CATTTCCAGA AAACCCGTCC CCAGGGCAAG CTTGTGAGCG TTTCCCTGGG CAGGGTATTT 
GATGTGGCCG TGGATATCCG GCCCGGGTCG CCCACCTTCG GCCAGTGGTA TGGCGTGGAG 
CTGACGCAGG ACAATCAGTG GCAGCTCTGG GTTCCGCCGG GCATGGCGCA CGGCTTTGCC 
GTGACCAGCC AGGTGGCGCA CTTTCATTAC AAGTGCACAG ACTATTACTG CCCCGAAGAC 
GAAGGGGGCA TACGCTGGAA CGATCCGGAC CTTGCTGTGG CCTGGCCCGT GGCGCAGCCT 
CTTTTGTCGG ACAAGGACCG GCACACGCCT TCGTGGCGGG AATTTCTGGC AGGACTGTAA
 
Protein sequence
MEVAATPLAG VMLIKPRVWG DRRGYFVETW QHERYAAAGI DAAFVQDNHS MSTYGILRGL 
HFQKTRPQGK LVSVSLGRVF DVAVDIRPGS PTFGQWYGVE LTQDNQWQLW VPPGMAHGFA 
VTSQVAHFHY KCTDYYCPED EGGIRWNDPD LAVAWPVAQP LLSDKDRHTP SWREFLAGL