Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0537 |
Symbol | |
ID | 7284204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 647657 |
End bp | 648328 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643581329 |
Product | ribosomal RNA methyltransferase RrmJ/FtsJ |
Protein accession | YP_002479126 |
Protein GI | 220903814 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0293] 23S rRNA methylase |
TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.164076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACAAAA AGGAGTACGC TTGCGCGTTG GTATTTATTA TGAAGGAATA TCGAGACCAT TACTTCCTCA AGGCCAAGCG CGAGAACTAT CCCGCGCGTT CGGTCTACAA GCTCAAGGAA CTGGACGCCA AATTCCGCCT GTTGCGGCCC GGCCAAAAGA TTCTGGACCT GGGGGCAGCC CCCGGATCCT GGTCATTGGG CGCGGCGGAA AAGGTGGGTT CCAGGGGCCT GGTCCTTGCC TGTGACATTC AAAGCACCGA GACGGCCTTT CCCCCCCAGG TCATTTTCAT GCAGGAAGAC GTGTTCAACC GCTCCCCGGC CTTTGAGGCC AGGCTGGAAG AACTCGGCCC CTTTGACCAT GTCATAAGCG ACATGGCCCC GCGCACCACA GGCACCCGCT TTACCGACCA GGCCCGCTCA CTGGATCTGG CTGTGGAGGC GCTGGCTGTG GCCTGCCTGC ATTTGAAGCA GGGCGGCGGC TTTGTGGTGA AAATTTTCAT GGGACCGGAC GTGCAGGAAC TGCTTGCGCC CATGCGCAAG GCTTTTACAA CGGTCAAGTC CTTCAAACCC AAGAGTTCGC GCGCCGAAAG CAAGGAAACT TTTTTTGTGG GCCTTGGCTT TCGCGGCAAG CCGAACCAGA CCGACCCTGT GGCCACGCCG CCGGGCAGGT AA
|
Protein sequence | MHKKEYACAL VFIMKEYRDH YFLKAKRENY PARSVYKLKE LDAKFRLLRP GQKILDLGAA PGSWSLGAAE KVGSRGLVLA CDIQSTETAF PPQVIFMQED VFNRSPAFEA RLEELGPFDH VISDMAPRTT GTRFTDQARS LDLAVEALAV ACLHLKQGGG FVVKIFMGPD VQELLAPMRK AFTTVKSFKP KSSRAESKET FFVGLGFRGK PNQTDPVATP PGR
|
| |