Gene Ddes_0537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0537 
Symbol 
ID7284204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp647657 
End bp648328 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content59% 
IMG OID643581329 
Productribosomal RNA methyltransferase RrmJ/FtsJ 
Protein accessionYP_002479126 
Protein GI220903814 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0293] 23S rRNA methylase 
TIGRFAM ID[TIGR00438] cell division protein FtsJ 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.164076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAAA AGGAGTACGC TTGCGCGTTG GTATTTATTA TGAAGGAATA TCGAGACCAT 
TACTTCCTCA AGGCCAAGCG CGAGAACTAT CCCGCGCGTT CGGTCTACAA GCTCAAGGAA
CTGGACGCCA AATTCCGCCT GTTGCGGCCC GGCCAAAAGA TTCTGGACCT GGGGGCAGCC
CCCGGATCCT GGTCATTGGG CGCGGCGGAA AAGGTGGGTT CCAGGGGCCT GGTCCTTGCC
TGTGACATTC AAAGCACCGA GACGGCCTTT CCCCCCCAGG TCATTTTCAT GCAGGAAGAC
GTGTTCAACC GCTCCCCGGC CTTTGAGGCC AGGCTGGAAG AACTCGGCCC CTTTGACCAT
GTCATAAGCG ACATGGCCCC GCGCACCACA GGCACCCGCT TTACCGACCA GGCCCGCTCA
CTGGATCTGG CTGTGGAGGC GCTGGCTGTG GCCTGCCTGC ATTTGAAGCA GGGCGGCGGC
TTTGTGGTGA AAATTTTCAT GGGACCGGAC GTGCAGGAAC TGCTTGCGCC CATGCGCAAG
GCTTTTACAA CGGTCAAGTC CTTCAAACCC AAGAGTTCGC GCGCCGAAAG CAAGGAAACT
TTTTTTGTGG GCCTTGGCTT TCGCGGCAAG CCGAACCAGA CCGACCCTGT GGCCACGCCG
CCGGGCAGGT AA
 
Protein sequence
MHKKEYACAL VFIMKEYRDH YFLKAKRENY PARSVYKLKE LDAKFRLLRP GQKILDLGAA 
PGSWSLGAAE KVGSRGLVLA CDIQSTETAF PPQVIFMQED VFNRSPAFEA RLEELGPFDH
VISDMAPRTT GTRFTDQARS LDLAVEALAV ACLHLKQGGG FVVKIFMGPD VQELLAPMRK
AFTTVKSFKP KSSRAESKET FFVGLGFRGK PNQTDPVATP PGR