Gene Ddes_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0535 
Symbol 
ID7284202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp645658 
End bp646473 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content61% 
IMG OID643581327 
ProductABC transporter related 
Protein accessionYP_002479124 
Protein GI220903812 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.426622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCAT GGGACATAGA ATTTCGCGCG CTCAGCGTGG GCTACGGCAG TCATGTGGTG 
CTCAGTGATG TCAACGCGGT GCTGCCCGGC GGCAAGGTCT CGGTCATTCT TGGCGGCTCC
GGTTGTGGCA AGTCCACCCT GCTGCGCCAT ATCATAGGCC TGTCCCGGCC TCTTTCCGGA
CAGGTGCTGG TGGGCGACCG TGATCTTTTC TCACTGGGCA AGGTTGATTT TCGCCGGGTA
CGCCGCCACA TGGGCGTCCT TTTTCAGGAC GGGGCACTGC TTGGTGCATT GAGTCTGGTG
CAAAATGTCA CCCTGCCCCT GAGCGAGCAC CTGCATCTGC CCCCGGCCCT GGTGCGTGAG
GCTGGCCTGC GTGTACTGCG CATGGTGGGC CTTGAAGATT TTGCCGATTT TTACCCCAAC
CAGCTTTCAG GCGGCATGCG TAAACGCGCG GGCCTGGCAC GCGCCATCAT CGCGGAGCCG
CGCGTTCTTC TTTGCGACGA GCCGACATCA GGGCTGGACC CCATCACGGC CGCCCGCATG
GATGACCTGC TGCTTGCCAT GCGCGGACAA TATGCCGGCA TGAGCGTTGT TGTGGTCAGC
CATGACCTTG CGAGCCTCAA GGCCATTGCC GACCATGTGC TTGTGCTTGG CGAAGGGCGC
GCACTGTTTT CCGGCACGCT GGCCGAACTT GAAGCCAGCG ATAACCCCTA CCTGCGGCAG
TTTTTACGAC GTGAGGCAGG CGACGAACGC CGCGACCTGC ATCAGCCCAT TGATCCCAAG
GTGAGCGAAG CCCTGGACAG GTGGCTGACT TCATAA
 
Protein sequence
MQAWDIEFRA LSVGYGSHVV LSDVNAVLPG GKVSVILGGS GCGKSTLLRH IIGLSRPLSG 
QVLVGDRDLF SLGKVDFRRV RRHMGVLFQD GALLGALSLV QNVTLPLSEH LHLPPALVRE
AGLRVLRMVG LEDFADFYPN QLSGGMRKRA GLARAIIAEP RVLLCDEPTS GLDPITAARM
DDLLLAMRGQ YAGMSVVVVS HDLASLKAIA DHVLVLGEGR ALFSGTLAEL EASDNPYLRQ
FLRREAGDER RDLHQPIDPK VSEALDRWLT S