Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0535 |
Symbol | |
ID | 7284202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 645658 |
End bp | 646473 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643581327 |
Product | ABC transporter related |
Protein accession | YP_002479124 |
Protein GI | 220903812 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.426622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGGCAT GGGACATAGA ATTTCGCGCG CTCAGCGTGG GCTACGGCAG TCATGTGGTG CTCAGTGATG TCAACGCGGT GCTGCCCGGC GGCAAGGTCT CGGTCATTCT TGGCGGCTCC GGTTGTGGCA AGTCCACCCT GCTGCGCCAT ATCATAGGCC TGTCCCGGCC TCTTTCCGGA CAGGTGCTGG TGGGCGACCG TGATCTTTTC TCACTGGGCA AGGTTGATTT TCGCCGGGTA CGCCGCCACA TGGGCGTCCT TTTTCAGGAC GGGGCACTGC TTGGTGCATT GAGTCTGGTG CAAAATGTCA CCCTGCCCCT GAGCGAGCAC CTGCATCTGC CCCCGGCCCT GGTGCGTGAG GCTGGCCTGC GTGTACTGCG CATGGTGGGC CTTGAAGATT TTGCCGATTT TTACCCCAAC CAGCTTTCAG GCGGCATGCG TAAACGCGCG GGCCTGGCAC GCGCCATCAT CGCGGAGCCG CGCGTTCTTC TTTGCGACGA GCCGACATCA GGGCTGGACC CCATCACGGC CGCCCGCATG GATGACCTGC TGCTTGCCAT GCGCGGACAA TATGCCGGCA TGAGCGTTGT TGTGGTCAGC CATGACCTTG CGAGCCTCAA GGCCATTGCC GACCATGTGC TTGTGCTTGG CGAAGGGCGC GCACTGTTTT CCGGCACGCT GGCCGAACTT GAAGCCAGCG ATAACCCCTA CCTGCGGCAG TTTTTACGAC GTGAGGCAGG CGACGAACGC CGCGACCTGC ATCAGCCCAT TGATCCCAAG GTGAGCGAAG CCCTGGACAG GTGGCTGACT TCATAA
|
Protein sequence | MQAWDIEFRA LSVGYGSHVV LSDVNAVLPG GKVSVILGGS GCGKSTLLRH IIGLSRPLSG QVLVGDRDLF SLGKVDFRRV RRHMGVLFQD GALLGALSLV QNVTLPLSEH LHLPPALVRE AGLRVLRMVG LEDFADFYPN QLSGGMRKRA GLARAIIAEP RVLLCDEPTS GLDPITAARM DDLLLAMRGQ YAGMSVVVVS HDLASLKAIA DHVLVLGEGR ALFSGTLAEL EASDNPYLRQ FLRREAGDER RDLHQPIDPK VSEALDRWLT S
|
| |