Gene Ddes_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0534 
Symbol 
ID7284201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp644734 
End bp645186 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content58% 
IMG OID643581326 
ProductMammalian cell entry related domain protein 
Protein accessionYP_002479123 
Protein GI220903811 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACTG TACGCGAAAC CGCTGTGGGC CTTTTTGTGC TGATTGGCCT GCTTTGTGTG 
GCTTATCTGA CCATCAAGCT CGGCAAGATG GAAGTTCTGT CCAACAAGGG CTACGAACTT
ACTGCCAATT TCGACTCTGT TTCCGGCCTG CGCGTCGGCG CAGACGTGGA AATGTCGGGG
GTGCCGGTGG GCAAGGTGAT CAGCATCAGC CTGGACCCGG ACCCCATGCG CAATCAGGCC
GTTGTGCGGC TGCGCCTTGA CAAGGACCTG CACCTTTCGG ACGACAGCAT CGCCTCCATC
CTGACCAGCG GCCTCATCGG CGACAAATAC GTCAGTATAT CCAGGGGCGG CTCGGACCAC
ATGCTCGCCC CCGGCGACAG CATCACGGAA ACAGAATCCG CCGTTGATCT CGGCTCTCTT
ATCAGTAAAT ACGCCTTCGG AGGAGTGAAA TAG
 
Protein sequence
MSTVRETAVG LFVLIGLLCV AYLTIKLGKM EVLSNKGYEL TANFDSVSGL RVGADVEMSG 
VPVGKVISIS LDPDPMRNQA VVRLRLDKDL HLSDDSIASI LTSGLIGDKY VSISRGGSDH
MLAPGDSITE TESAVDLGSL ISKYAFGGVK