| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0513 |
|---|
| Symbol | |
|---|
| ID | 7284180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 622449 |
|---|
| End bp | 623249 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643581305 |
|---|
| Product | rare lipoprotein A |
|---|
| Protein accession | YP_002479102 |
|---|
| Protein GI | 220903790 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0797] Lipoproteins |
|---|
| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.411348 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTATT CACGCTGGCC TTCCATGCTG GCGGTCGCGG TCGCATGTAT GCTATTGGCC
GCCCCCATGA AAGCCGACGC GGCTTCTGCA AGCGCTCCTT CCGCTGAACT CTCTTCAAAC
GCATCCTCAT CCGGCGCCTC CAAAGCTGTA AAAAAATCAT CCCAAGCGCG CCCCGCCAAG
TCTGAAAAGA ATAAAAAAGC TGTTAAAACC AGCCAGTCCG GCAAAGCGGC TAAAACTGCC
AAAAGCGGCA AGGCAGCAAA GTCTTCTGCC AAAAGCAAAG CCGTATCCGA ACAAAGCGTT
GACAGCCGCG ACATATGGCT CAAACGCGCC CAGCAAAGCG AAGTTTTCAC CGGCAAAGCA
TCCTGGTACG GCCGCGACTT TCACGGCGGC GCCACAGCCA GCGGCCTTAA CTACGACATG
TACACCTTCA CCGCTGCCCA CCGTACTCTG CCCATGGGGA CTGTCGTGCG TGTGACCGAC
CAGGAGAACG GCAAGAGCGT CATGGTTTGC GTGACAGACC GCGGCCCCTT TGTGCGCGGC
CGCATCATTG ACCTTTCTTT TGCCGCTGCC CAGCAGCTTG ACCTTGGCAC ACGTGGCGTG
GGCAAGGTGG AGCTTGAGGT GGTCAGCGAC GAAAGCGGAA CCCCCCTGCA GGCCGATCAG
GCCTACTATG TGCGTTACAA TGCCGCCATG GGAGACGAAC GCATCGGCCC CTTCCGTGCC
TTTGCGGATG CCGCCGCCAT GCATGAGGCC CTGCGCCAGG CCCATCCCGA AGCAGAAGTT
GTACTGGGGC ACTCCCGCTA G
|
|---|
| Protein sequence | MKYSRWPSML AVAVACMLLA APMKADAASA SAPSAELSSN ASSSGASKAV KKSSQARPAK
SEKNKKAVKT SQSGKAAKTA KSGKAAKSSA KSKAVSEQSV DSRDIWLKRA QQSEVFTGKA
SWYGRDFHGG ATASGLNYDM YTFTAAHRTL PMGTVVRVTD QENGKSVMVC VTDRGPFVRG
RIIDLSFAAA QQLDLGTRGV GKVELEVVSD ESGTPLQADQ AYYVRYNAAM GDERIGPFRA
FADAAAMHEA LRQAHPEAEV VLGHSR
|
|---|
| |