| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0511 |
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| Symbol | |
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| ID | 7284178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 619494 |
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| End bp | 620861 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643581303 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_002479100 |
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| Protein GI | 220903788 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.113199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAT TGTCCATAGC CGTGGTGGGT GGTGGCCTTG CCGGCTGCGA ATGCGCGTTG
CGCCTAGCCC GCTCCGGACA TACGGTGGAG CTTTTTGAAC AAAAGCCCCT GTTCCGCTCA
CCAGCCCACG TCAGCGACCA TCTGGCGGAG CTTGTATGCT CCAACTCCCT GCGATCGGAC
GAACCAACCT CGGGCGTGGG GCTGCTCAAG GCTGAAATGC GCGCCTTGGG CAGCCAGTTT
ATGGAGGCTG CCGACGCCTG CCGCGTACCT GCTGGCAAGG CCCTTGCCGT AGACCGAGAG
GCTTTTGCCC GCAGCATGAG TGAACGTGTT GAGGCCGAAG CAAACATCCG TCTTGTGCGG
CAGCAGGTGC AGTCGCTGGA CGATGCGGCG CTGGAGCCGT TCAAGGGAGA AGGGCGCGCT
GTCATCGTGG CCGCAGGGCC GATGGCGTCC GACGGGCTGT CGGCTTCTCT GGCCGGAGCG
CTGGGCGAAA AGCACTGCTA TTTTTACGAT GCCATAGCTC CTATCATCTG GACGCATTCC
TTGAATATGG ACATTGTTTT TCGTGCTTCG CGTTATGGGC AGGAAAATGG CGAGGCCGAA
GGAGAGGGCG ATTACCTGAA CTGTCCCATG AGCCGCGAGG AATACGAAGT TTTCTATCAG
GCCCTGCTGG ACGCCCAAAA GGTGGCCGCG CACGAATTTG AGCAGGAAAA ACATTTTGAA
GGATGTATGC CGGTGGAAAC ACTGGCCGAG CGCGGTCACC GTACGCTCAC CTTTGGCCCG
CTCAAGCCTG TGGGCTTTGT GGACCCGCGC ACAGGCCGCC GCCCCTGGGC CATTCTGCAA
CTACGGGCTG AAAACGCCAA CAGCGATACC TGCAACCTTG TGGGCTGCCA GACCAAGCTG
ACCCAGGGGG AGCAGGCGCG TGTTTTCCGC CTTGTGCCGG GGCTGGAAAA GGCGGAATTT
GCCCGCTTCG GCAGCATGCA CCGCAATACC TATGTGAACG CGCCGCATGT GCTGGATGCT
GACCTGTCCC TCAAGGCGCG GCCGGGCATT TATCTTGCCG GGCAGATTAC CGGCGTGGAA
GGCTATGTGG AATCCGCCGC CAGCGGCCTG TGGCTTGCCC TCCTGCTGGA TGCGCGCGCC
CGTGGAATTG ATCTGGAGCG CCCCCCGGCG GAAAGCGCCT TTGGGGCTTT GCTCGGGCAT
CTGCAAACCC CGGCCAAACG GTTTCAGCCT TCCAACGCCC ACTTCGGCCT TATGCCGGAC
CTGGGGGAAA GGGCGCGCAA AAAAGACCGC AAGGCGCTTT ATTCGGCCCG GGCGCAAGAA
GCATTCGCCC CCTGGCTGCA TGAACTGAAG ACAGCCGGTT TGGCCTGA
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| Protein sequence | MQKLSIAVVG GGLAGCECAL RLARSGHTVE LFEQKPLFRS PAHVSDHLAE LVCSNSLRSD
EPTSGVGLLK AEMRALGSQF MEAADACRVP AGKALAVDRE AFARSMSERV EAEANIRLVR
QQVQSLDDAA LEPFKGEGRA VIVAAGPMAS DGLSASLAGA LGEKHCYFYD AIAPIIWTHS
LNMDIVFRAS RYGQENGEAE GEGDYLNCPM SREEYEVFYQ ALLDAQKVAA HEFEQEKHFE
GCMPVETLAE RGHRTLTFGP LKPVGFVDPR TGRRPWAILQ LRAENANSDT CNLVGCQTKL
TQGEQARVFR LVPGLEKAEF ARFGSMHRNT YVNAPHVLDA DLSLKARPGI YLAGQITGVE
GYVESAASGL WLALLLDARA RGIDLERPPA ESAFGALLGH LQTPAKRFQP SNAHFGLMPD
LGERARKKDR KALYSARAQE AFAPWLHELK TAGLA
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