Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0510 |
Symbol | |
ID | 7284177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 616990 |
End bp | 619287 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643581302 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_002479099 |
Protein GI | 220903787 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.226401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAAGT CGTCCAAAAC CTTCATAGCT ATCGTTGTTC TCGCGATGTT ATTCACCGCG CTGCTCATAG TGGTGCGCGA ATACACCGTG GAAACAACAC GCCATCTGTC ACAGGACATC ACTACCCGGC TTGCCGAAGT GAGCCTGCGT GTGGCCGACG ACTTTGAACA CAGCATTGAC AACAAACTGA CTGAATTGCA AGGCATTACC GGTTTTCTGG CTAAAGAGGA CTGCCTGCCC CGCAAAGACT GTGTGCTGCA TTATGCCCCG CTGCTGCGTG CCGCCGGCCT GAAAAGGTTT GCCATCATCA GCCCGGACGG CCAGGGCTTT TGCTCCATGA CGGGGCTACC CATTGATATT GAACAGAACA GCAAAAAAAG CCTGTTCGAA CGTGCCCTGG CCGGAACAGC CAATATTGCC GCCGTGCCTG ACGGCAAGGG CAGCAAGCTT GCCGTAGCGC TGCCCATACA GCGAAACAAG GAAATTGTGG CTGTTCTCAT CGGCGAACTT GAAGACGAGC CGATGAAAAA AAGCCTGTTT ACCAGGGCAT TTGGCGATAA AACCTGTAAC ATGGTTTTCG ACGGCAACGG GCGCCTGCTG TTCTCGGCCG CGCCGCCGGG CAGTCTGGAC AGGCTGTTTC CGCAAATGGC GGAAAAAGGG CTGCCCACCT CACTGCGTGA ACACCTGCTG ACCATTTTTT CCGATATCAC GCCCGGACCG GACTGTCAGC GGAAAACAGA CTGCCTGATA AAAGACGACC ACCATTCCTA CTACGTGACG CACGTGCCGC TACAGCAATA TGGCTGGCAG GTGGTTTCGC TGCTGCCGGA AGAAGTGGTG AAGCATCTGG TGGACAGGCA GAACGACATT ACCACCACGC TGGCCTGGCG GCTGTCCATC CTGGCCGGGC TGCTGCTGGT TCTCATCATC GGCGTCATGC AAAGCTACCA CCGCACCATC CACCGCCAGC AGGAAGACTA CCGCTCCATC ATTGCAAGCA TATCCGGCGG TGTCATCAAA TTCGGCGGGC TGCACGGCAC ATTCCAGTTT ATCAGCCCCA ATTTTCTCAA GATGCTGGGG TACCGCAAAG ACGAGTTCGA GCAACGCTTC GGCAAGGATT TTGCCCTGTC CATTTTTGAG CCTGACCGGG AAAACGCCCT CCGCACCATG CAGCAGCAAC TGGAAGCTGG CATTCCCATT GATGTGGAAT ACCGCACCAG CGCCAAAAAC GGCGCTCTTA TCTGGCTGTA CCACAAGGGG TCTCCGGTGC AGGCCGGACC AGGGCAAACG TATATCCAGA GCATCGTTTT TGACATTACC CAAAATAAAG AGGCCGCACA GGCCAAACGG ATTTCCGACG AGCGCTACCA GTTCATTCTG GAGCAGCATG ATATTATTAT CTTTGAGCAG AATCTTATTA CCGGCAACTT CTCCTGTTCT GCAAAATGGA TGCAGACCTT CGGTCACGTG TTCAACATTC TTGAGCCGAA TCCGGAACAG GGGCGCATTC CCGTGCATGC AGAAGACCAC GAACTGCTTG AAGATTTTCA AAAGCGCGTA CATCAGGACA TGCACGAACA TAAAAAACAG GTTGAACTGC GCCTGCGCGA TGCCAGCGGC CTGTACCACT GGTACCGCAT TGAGGCCTCA AGCCTCATCA GCGCCCAGGG CAAGCCCATA TATTTTATCG GCATCATTAC CGATATAGAC CGGCAAAAAA CGCTGGAACT GCGCCTGCGC ACCCAGGCCA CGCGCGACAG CGCCACAGGC ATGTACAACA AACGCGCCAC AGAACAGGCC ATTTCGCGGT TTCTGAGCCT GCACAACGGC TCCAGTATCG GCATTTACGC CATGTTCATG ATAGATTTTG ACAACTTCAA GAGCATCAAC GACAGGTTTG GCCATACCGT GGGTGACAAG GCCATTTACC AGATGGCCCA GATCATCCGC CGTAACTTCC GCAGCAGTGA TATTGTGGGC CGTGTGGGCG GCGATGAATT TCTTGTTTTC TGCACCGAAA CCATGCCGCT TTCCAAAATA CACGAAAGAG CCGCAACCCT CGTCAGGCAA TTGCGGCTTC ATTGCGGACA GGGGGAAGAC GACCAGCCCC TTACCGCCAG CGTGGGAGTG TCCTGCCACC CCACTGACGG GCATGATTTT TCGGAACTCT ACAAACATGC CGACATGGCC ACCTATGAGG CCAAAAGACG GGGCCGCAAC CAGTGCGTTT TTTATGCGGA ACTGACCGCC GGGGAACAAA AAAGCGCTCA CGATTCCCTT TTTCCCGAAG AGCAATGA
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Protein sequence | MVKSSKTFIA IVVLAMLFTA LLIVVREYTV ETTRHLSQDI TTRLAEVSLR VADDFEHSID NKLTELQGIT GFLAKEDCLP RKDCVLHYAP LLRAAGLKRF AIISPDGQGF CSMTGLPIDI EQNSKKSLFE RALAGTANIA AVPDGKGSKL AVALPIQRNK EIVAVLIGEL EDEPMKKSLF TRAFGDKTCN MVFDGNGRLL FSAAPPGSLD RLFPQMAEKG LPTSLREHLL TIFSDITPGP DCQRKTDCLI KDDHHSYYVT HVPLQQYGWQ VVSLLPEEVV KHLVDRQNDI TTTLAWRLSI LAGLLLVLII GVMQSYHRTI HRQQEDYRSI IASISGGVIK FGGLHGTFQF ISPNFLKMLG YRKDEFEQRF GKDFALSIFE PDRENALRTM QQQLEAGIPI DVEYRTSAKN GALIWLYHKG SPVQAGPGQT YIQSIVFDIT QNKEAAQAKR ISDERYQFIL EQHDIIIFEQ NLITGNFSCS AKWMQTFGHV FNILEPNPEQ GRIPVHAEDH ELLEDFQKRV HQDMHEHKKQ VELRLRDASG LYHWYRIEAS SLISAQGKPI YFIGIITDID RQKTLELRLR TQATRDSATG MYNKRATEQA ISRFLSLHNG SSIGIYAMFM IDFDNFKSIN DRFGHTVGDK AIYQMAQIIR RNFRSSDIVG RVGGDEFLVF CTETMPLSKI HERAATLVRQ LRLHCGQGED DQPLTASVGV SCHPTDGHDF SELYKHADMA TYEAKRRGRN QCVFYAELTA GEQKSAHDSL FPEEQ
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