Gene Ddes_0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0509 
Symbol 
ID7284176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp615630 
End bp616703 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content59% 
IMG OID643581301 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_002479098 
Protein GI220903786 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CTATCTGCCT GTTGCCCGGC GACGGTATCG GCCCGGAAAT AGTAGCCCAG 
GGCGTCAAGG TTCTGGAAGC CACGGCTGAA AAATCCGGCC ATCAGTTTGT TTTTGAGACG 
GCCCTTATCG GCGGGGCGGC CATTGACGCC GCGGGCGATC CCTTACCTGA GGACACAGTA 
CGGCTGTGCC GCACTGCTGA TGCCGTGTAT CTCGGCGCGG TGGGCGGTCC CAAATGGGAT 
GGCATGAGCC AGGATCTGCG GCCCGAAAAA GGGCTGCTGC GCATTCGCAA AGAGCTTGGC 
CTGTTTGCCA ATCTGCGCCC GGCCATGCTT TTGCCCGAGC TTGCGGGGGC CTGCCTGCTG 
CGGGCCGACA TTGCGGCCAG GGGGCTTGAC CTTATGGTGG TGCGCGAACT GACCGGTGAT 
GTGTATTTCG GCGAACCACG CGGCATTGAA GTGCGCGACG GCCTGCGCAC CGGCTACAAT 
ACCATGCTGT ATACTGAGGA AGAGATCCGT CGTATCGCCG TGATTGCGTT TGAAACGGCC 
CGCAAGCGCA GACGCCGGGT ATGCTCGGTG GAGAAGAGCA ACGTGCTGGA ATGCTCGCGC 
CTCTGGAAAG AAGTTGTCAT GGAGGTGCAC CGGGAATATG CCGATGTGGA ACTGAGCCAC 
ATGTATGTGG ACAATGCCGC CATGCAGCTT GTGCGCGATC CCTCGCAGTT TGATGTGATT 
CTGACCGGCA ATATTTTTGG CGATATCCTG TCGGACGAGG CTTCGGTCAT TACCGGTTCT 
CTGGGCATGC TGCCTTCGGC CTCTACCGGG GCAGAAGGGC CGGGGCTGTT TGAACCCATA 
CACGGCTCGG CTCCGGATAT AGCGGGCCAT GATATAGCCA ATCCCCTGGC GACCATTCTT 
TCAGCCGCCA TGATGCTGCG GCTGGGCTTT GATATGGCCG AAGAGGCTGA CCATATTGAA 
ACGGCCGTGC GCAAGGCCCT GGCTGACGGT TTTCGCACTG CCGACATTAT GGAGCCCGGT 
AAAGAACTGC TGGGCTGCGC TGCCATGGGT GATAAGGTGG TGGAACGCCT GTAG
 
Protein sequence
MKKTICLLPG DGIGPEIVAQ GVKVLEATAE KSGHQFVFET ALIGGAAIDA AGDPLPEDTV 
RLCRTADAVY LGAVGGPKWD GMSQDLRPEK GLLRIRKELG LFANLRPAML LPELAGACLL 
RADIAARGLD LMVVRELTGD VYFGEPRGIE VRDGLRTGYN TMLYTEEEIR RIAVIAFETA 
RKRRRRVCSV EKSNVLECSR LWKEVVMEVH REYADVELSH MYVDNAAMQL VRDPSQFDVI 
LTGNIFGDIL SDEASVITGS LGMLPSASTG AEGPGLFEPI HGSAPDIAGH DIANPLATIL 
SAAMMLRLGF DMAEEADHIE TAVRKALADG FRTADIMEPG KELLGCAAMG DKVVERL