Gene Ddes_0507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0507 
SymbolleuD 
ID7284174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp614856 
End bp615353 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content59% 
IMG OID643581299 
Product3-isopropylmalate dehydratase small subunit 
Protein accessionYP_002479096 
Protein GI220903784 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTACA AGGGCAAGGC CCACAAGGTG GGCGAACATA TTGACACGGA CGCCATCATT 
CCCGCGCGCT TTCTTGTAAC CACCGATGCA CAGAAGCTCG GCGAAAACTG CATGTCCGGT
CTTGAGCCAA GCTGGGCAAG CCGCGTGGCC CCCGGCGACA TTATGGTGGC CGGGCGCAAT
TTCGGTTGCG GCTCATCGCG CGAGCATGCC CCCATCGCCA TTCTGGGGGC GGGCATGCCC
GTGGTTATCG GCCACAGTTT TGCGCGCATT TTTTACCGCA ACGCCTTCAA TATGGGGCTG
CTGCTTATGG AAGTGGGCGA TGAGGTGGAC AAGATCAGTG ATGGAGATGC ACTGGAAATT
GACGCCTCCA CAGGAGCAAT CCGCAACCTG ACCACCGGGG CTGAAATCAC CTGCCCGCCA
TTGCCTGCGT CAATGGCCGC CATTCTGGCA AAGGGAGGGC TGGTGGGCTA CGTGAAGGAA
AGGCTCGCCC AGGTATAG
 
Protein sequence
MNYKGKAHKV GEHIDTDAII PARFLVTTDA QKLGENCMSG LEPSWASRVA PGDIMVAGRN 
FGCGSSREHA PIAILGAGMP VVIGHSFARI FYRNAFNMGL LLMEVGDEVD KISDGDALEI
DASTGAIRNL TTGAEITCPP LPASMAAILA KGGLVGYVKE RLAQV