Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0492 |
Symbol | |
ID | 7284158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 601819 |
End bp | 602520 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643581284 |
Product | protein of unknown function DUF554 |
Protein accession | YP_002479082 |
Protein GI | 220903770 |
COG category | [R] General function prediction only |
COG ID | [COG1811] Uncharacterized membrane protein, possible Na+ channel or pump |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.1131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGGTC CCATAATTAA CAGCACTTGC TTGGCGGCAG GCAGCATCAT AGGAGCTGTT TTTGCCTGCT ATATTCCAGC ACGTGTAAAA TCATCACTTC CCCTGACAGC AGGGCTTATC ACGCTAAGTT TGGGCAGCTC CCTGGTCGGA AAAGCCGCAC ATTTTCCTGC GGTTGTTCTT TCCACCCTTG TCGGCGCTGC CATTGGGGAA CTGTTTTATT TTGAAAAAGG CCTTGAAACT GCAATTAAAC GCCTTCTGAC ACGTTCAAAA AAATCCGGCG ACATCAACAA CGAAGAACTT GCCCTTCAGT ATATAACGCT TGTTTCCGCA TTCTGCTTCG GAAGTATGGG CCTGTTCGGC GCGGTTGAAG AAGGCATCAC CGGAACTACA GGACTATTAT TAACAAAAAG CGTTCTTGAT TTATGCAGCG GCATTATCTT CGGAGCCAGC CTGGGGGCCA ACGTCGGGAT TATTGCTATT CCTCAATTCT TGATACTTGC CGGGCTATGC TGGTCAGGAA ATAAAATCAT ACCGCTGATT ACTCCTGAAA TGCTGCAAAA CTTCAGCTCT ACTGGGGGCA TCATTTTTCT TGCGACAGGA ATACGGATGT GTGGCATCAA AACCATTCCC ATTATTACCA TGATCCCATC CCTTGTGCTT ATTTTTCCCT TCACAAAACT CTGGATGTGG CTTGGATTCT AA
|
Protein sequence | MTGPIINSTC LAAGSIIGAV FACYIPARVK SSLPLTAGLI TLSLGSSLVG KAAHFPAVVL STLVGAAIGE LFYFEKGLET AIKRLLTRSK KSGDINNEEL ALQYITLVSA FCFGSMGLFG AVEEGITGTT GLLLTKSVLD LCSGIIFGAS LGANVGIIAI PQFLILAGLC WSGNKIIPLI TPEMLQNFSS TGGIIFLATG IRMCGIKTIP IITMIPSLVL IFPFTKLWMW LGF
|
| |